Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  162 bits (410), Expect = 9e-45
 Identities = 101/284 (35%), Positives = 154/284 (54%), Gaps = 3/284 (1%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           ME R+++YF AVAE  HF RAA+ LGI+QPPLSQQI+ LE+E+G  LF+R +R VEL+ A
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQVLGISQPPLSQQIQALEQEVGARLFERTNRRVELSEA 60

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           G LF  +A  +L QV++A D  R+   GE  EL++GF +S   +S + + +    +  P 
Sbjct: 61  GRLFLHEARLVLAQVDKAADVARRAQLGELGELKIGFTSSAPFNSSIPQAIFAFRQAFPA 120

Query: 122 LQLIAVEHPMPELARMIQEKQLDIAFMRLPCYASEALRRKILFDDPFVAVIPAVHTLAEV 181
           + L   E    E+A  + ++ + +  MR P    ++L    L  +P VAV+ A H L   
Sbjct: 121 VHLNLQEMSSTEVAESLVDESIQVGLMR-PLPLPDSLSVVELMREPLVAVMNAGHPLVAG 179

Query: 182 EK--IQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMAQAG 239
            +  + L QL  E  + FPR  G  LY  + +    AG +   +  A +  T I +  AG
Sbjct: 180 SERGLHLAQLAEEPFVFFPRSYGSGLYAQLLSLCRDAGFSPHFAQEAGEAMTIIGLVAAG 239

Query: 240 FGIAIVPLSLTDHLDHSVVVKTIQDMPFVSQVAIVSDAGHHHPL 283
            G++++P S        VV +T+ D   V+ V +V   G   P+
Sbjct: 240 LGVSVLPASYQRIRIDGVVYRTLLDPEAVTSVWLVQRKGAQTPM 283