Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  124 bits (310), Expect = 3e-33
 Identities = 86/287 (29%), Positives = 142/287 (49%), Gaps = 9/287 (3%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           M+ R+ +YF AVA  ++FTRAAEQLGIA P LS+QI+ +E  LG  LF R  R V LT A
Sbjct: 1   MDIRHFRYFLAVARQRNFTRAAEQLGIAPPTLSRQIQDMETTLGTRLFVRQQREVSLTEA 60

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           G     +A + ++Q E A+   ++  RGE   ++LG+ AS   S ++  +++   +  PD
Sbjct: 61  GAALLIEAEATVRQFEFAQRNAQRAGRGEIGHIQLGYVASAVYSGLLQRQMQAFVQAFPD 120

Query: 122 LQLIAVEHPMPELARMIQEKQLDIAFMRLPCYASEALRRKILFDDPFVAVIPAVHTLAEV 181
           + +   E  M  L   + + ++DI ++R P    E +    L  + FV  +P    L  +
Sbjct: 121 VSVNVRECAMATLPGAVADGRVDIGYIRSPMTLPEGIEAVRLDSEGFVLALPQDSWLLGL 180

Query: 182 EKIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAP-QLRTAITMAQAGF 240
           + I    L +E  ++ P ++   L        +A G    R    P  L   + +   G 
Sbjct: 181 KAIGCEHLQNETFIL-PEQISGTL------QVAAQGGYAPRLGPQPGGLVAVVALVSLGQ 233

Query: 241 GIAIVPLSLTDHLD-HSVVVKTIQDMPFVSQVAIVSDAGHHHPLLNR 286
           G+A+VP S+  H+    VV ++IQ     S ++++       P + R
Sbjct: 234 GVAVVPASMVGHVSLPGVVYRSIQGSDASSWLSLIHRRFEQAPAVAR 280