Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  119 bits (297), Expect = 1e-31
 Identities = 82/281 (29%), Positives = 143/281 (50%), Gaps = 6/281 (2%)

Query: 1   MMEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTP 60
           M++ R ++YF  VAE +H  RAAE+L I+Q PLS+QI +LEE LG+ LF+R  + + LT 
Sbjct: 1   MIDLRQLRYFEVVAEEEHVGRAAERLHISQSPLSRQIAQLEERLGLTLFERSQQRIRLTR 60

Query: 61  AGELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIP 120
            G+ F  +  ++L    R +   R+  RGE   L +G+  +   + V+   +R L +  P
Sbjct: 61  DGQTFLAETKALLTHANRLESLGRRLGRGEEGGLCIGYIENAMHAGVLPNALRVLRDDRP 120

Query: 121 DLQLIAVEHPMPELARMIQEKQLDIAFMRLPCYAS--EALRRKILFDDPFVAVIPAVHTL 178
            + +     P  E    ++++ LDIA +  P  A   + + R++L DDP +  +P  H L
Sbjct: 121 TVHIKLYNLPSLEQLEGLRQRSLDIALVGEPPAADDPDLIARQVL-DDPMLLALPEHHPL 179

Query: 179 AEVEKIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMAQA 238
           A   ++    L  +  +   R+ G    D+  AA   AG        A +  TA+ +  +
Sbjct: 180 ARQSELLPEHLADQEWIGVQRKPGANPADDFVAACIRAGFTPQIPMEAGEPFTALGLVAS 239

Query: 239 GFGIAIVPLSLTDHLDHSVVVKTIQDMPFVSQVAIVSDAGH 279
           G G+A+V   L+ +    VV   ++++P+++    +  A H
Sbjct: 240 GLGVAMVQKGLSRNAPPGVV---LRELPWLNYTTPLWAAWH 277