Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., LysR family transcriptional regulator STM3121 from Variovorax sp. SCN45

 Score =  148 bits (374), Expect = 1e-40
 Identities = 91/268 (33%), Positives = 138/268 (51%), Gaps = 5/268 (1%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           M+ R ++YF AVA   H TRAAEQLGI QPPLS QIK LE ELG+ LF+R  RGV LT A
Sbjct: 1   MDIRALRYFVAVAGTGHMTRAAEQLGIQQPPLSLQIKALERELGMPLFRRHPRGVALTDA 60

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           G LF  +A  +LQ +E  K R+ + A+G+   L +GF +S A+   + E +R      P 
Sbjct: 61  GRLFQAEALRMLQDMESMKQRMARVAKGQADTLAVGFTSSAAAHRFMPEALRAFRRAYPL 120

Query: 122 LQLIAVEHPMPELARMIQEKQLDIAFMRLPCYASEALRRKILFDDPFVAVIPAVHTLA-- 179
           ++L   E    EL   +   +L    +R+P    E L  + +  +P +  +P+ H  A  
Sbjct: 121 VELQLREDNAAELTDALAAGRLHCGLLRVPVARPEGLVFETMLREPVLVAMPSDHRFALA 180

Query: 180 ---EVEKIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMA 236
                  + L +L  E +++  R   P LY  + A   A G+         ++ T + + 
Sbjct: 181 RTKASRPLPLARLCEEGIILVRRPGAPGLYAELLALCHAKGLRPRVVAEVDRMMTNLNLV 240

Query: 237 QAGFGIAIVPLSLTDHLDHSVVVKTIQD 264
            AG G+++VP S+T    H++    + D
Sbjct: 241 AAGVGLSVVPASMTGVHAHAIAYTRLAD 268