Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  166 bits (419), Expect = 8e-46
 Identities = 101/284 (35%), Positives = 154/284 (54%), Gaps = 3/284 (1%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           ME R+++YF AVAE  HF RAA+ LGI+QPPLSQQI+ LE+ELG  LF+R +R VEL+ +
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQALGISQPPLSQQIQTLEQELGTRLFERTNRRVELSES 60

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           G LF  +A  +L QV++A D  R+   GE  EL++GF +S   +S + + +    +  PD
Sbjct: 61  GRLFLDEARLVLAQVDKATDVARRAQLGEIGELKIGFTSSAPFTSSIPQAIFAFRQACPD 120

Query: 122 LQLIAVEHPMPELARMIQEKQLDIAFMRLPCYASEALRRKILFDDPFVAVIPAVHTLA-- 179
           + L   E    E+A  +++K + +  MR P    ++L    L  +P VA++ A H LA  
Sbjct: 121 VHLTLTEITSQEVAAGLEDKTIQVGIMR-PLALPDSLVVFELLSEPLVAIMRADHPLAAE 179

Query: 180 EVEKIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMAQAG 239
             E I +  L  E  + FPR  G  +Y  + +   AAG +   +  A ++ T I +  AG
Sbjct: 180 SEEGIYMAALAAEPFVFFPRTYGSGIYAQVLSLARAAGFSPLITQEAGEVMTIIGLVAAG 239

Query: 240 FGIAIVPLSLTDHLDHSVVVKTIQDMPFVSQVAIVSDAGHHHPL 283
            G+ ++P S        VV + + D    S V +V       P+
Sbjct: 240 LGVTVLPASYRRMRIDGVVYRNVLDPGATSAVWLVQRKDEQSPM 283