Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Transcriptional regulator, LysR family from Sphingobium sp. HT1-2

 Score =  140 bits (352), Expect = 5e-38
 Identities = 94/260 (36%), Positives = 134/260 (51%), Gaps = 4/260 (1%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           M+ R+++YF  VAE  HF RAA +LGI+QPPLSQQI+ LEEELGV LF R SR V LT A
Sbjct: 1   MDLRHLRYFLTVAEEMHFGRAALRLGISQPPLSQQIRALEEELGVRLFDRTSRRVRLTEA 60

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           G LF  +A + L Q +RA    R+  RGE   L LGF AS      +   + +  +T P 
Sbjct: 61  GRLFEPEARATLVQADRASQTARRAQRGEIGHLGLGFTASGPFVPQIASALYRFRQTYPQ 120

Query: 122 LQLIAVEHPMPELARMIQEKQLDIAFMR--LPCYASEALRRKILFDDPFVAVIPAVHTLA 179
           ++LI  E    E    ++  QLDI  +R  LP    E +    L  +  +  +   H LA
Sbjct: 121 VELILREQGRDEQIENVRNHQLDIGLVRDFLPPVLPEDMVSHCLLTEDMLLALRDDHPLA 180

Query: 180 -EVEKIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMAQA 238
              E   +  L  E ++++    G    ++  A   AAG     ++ A  L T + +  A
Sbjct: 181 LRKEDPSITDLAGEPLVLYGAPNGAGFTEHFFAQCEAAGFVPRIAHEARSLATLLGLVSA 240

Query: 239 GFGIAIVPLSLTD-HLDHSV 257
           GFG  ++  S+   H+D+ V
Sbjct: 241 GFGPTVIARSMARLHVDNVV 260