Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  167 bits (423), Expect = 3e-46
 Identities = 103/281 (36%), Positives = 157/281 (55%), Gaps = 4/281 (1%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           ME R+++YF AVAE  HF RAA+QLGI+QPPLSQQI+ LE+ELG  LF R +R VEL+ A
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEA 60

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           G LF ++A  +L QVE+A D  R+   GE  E+++GF +S   +S + + +    +  P 
Sbjct: 61  GRLFLEEARQVLAQVEKAADVARRAQLGELGEMKIGFTSSAPFTSKIPKAIHAFRQRFPA 120

Query: 122 LQLIAVEHPMPELARMIQEKQLDIAFMRLPCYASEALRRKILFDDPFVAVIPAVHTLAE- 180
           + L   E    ++A  + ++ +++  MR P    E L    LF +P VAVI A H LAE 
Sbjct: 121 VHLNLKEMSSRDVAEGVFDESIEVGLMR-PMPLPEGLVATELFREPLVAVINASHPLAEG 179

Query: 181 -VEKIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMAQAG 239
             + + +  L  E  + FPR  G  L+  + +    AG +   +  A +  T I +  AG
Sbjct: 180 TEQGVYMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGLVSAG 239

Query: 240 FGIAIVPLSLTDHLDHSVVVKTIQDMPFVSQVAIVS-DAGH 279
            G++++P S        VV +T+ D   ++ V +V  + GH
Sbjct: 240 LGVSVLPASFQRMRIEGVVYRTLLDEEAMTAVWLVQRERGH 280