Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., HTH-type transcriptional regulator from Pseudomonas putida KT2440

 Score =  155 bits (393), Expect = 8e-43
 Identities = 99/288 (34%), Positives = 160/288 (55%), Gaps = 5/288 (1%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           ME R+++YF  +AE  +FTRAAE L IAQPPLS+QI +LE++LG  L  R  R + LT A
Sbjct: 1   MELRHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLGTLLVVR-ERPLRLTEA 59

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           G  FY+   ++LQQ++   D  R+  +G+   L +GFA ST   +V+ E +R+L +   +
Sbjct: 60  GRFFYEQTCTVLQQLQNISDNTRRIGQGQRQWLGIGFAPSTL-YTVLPELIRELRQD-SE 117

Query: 122 LQLIAVEHPMPELARMIQEKQLDIAFMRLPCYASEALRRKILFDDPFVAVIPAVHTLAEV 181
           L+L   E    +    ++  ++DI F R+       + +++L +DP VAV+P  H LA  
Sbjct: 118 LELGLNEMTTLQQVEALKSGRIDIGFGRIR-IDDPVIHQQVLCEDPLVAVLPKGHPLAG- 175

Query: 182 EKIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMAQAGFG 241
             + L QL  E  +++P    P+  D++ A F+  G++I  S  A +L+TAI +   G G
Sbjct: 176 SPLSLAQLAGEAFILYPANPRPSYADHVLALFAHHGMSIRVSQWANELQTAIGLVAVGVG 235

Query: 242 IAIVPLSLTDHLDHSVVVKTIQDMPFVSQVAIVSDAGHHHPLLNRCIA 289
           + +VP S+       +    + D   VS + +    G   P++ RC+A
Sbjct: 236 VTLVPASVQQQHRPDIEYVGLLDSGAVSPIILSRRKGDVSPIVQRCLA 283