Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  140 bits (352), Expect = 5e-38
 Identities = 90/270 (33%), Positives = 136/270 (50%), Gaps = 5/270 (1%)

Query: 1   MMEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTP 60
           M+E R ++ F AVAE  HF +AA++L +AQPPLSQ I +LEE+LG  L  R  RGV LT 
Sbjct: 1   MIETRLLRQFIAVAEELHFHKAAQRLHMAQPPLSQAINRLEEKLGFGLLLRNKRGVRLTA 60

Query: 61  AGELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIP 120
           AG  F   A   L ++E+  +  R  + G   +L +  A S A    +L ++R+  ET P
Sbjct: 61  AGAAFLDTAYRTLAELEQGIEYARNVSAGVSGKLTI-TAISIAYYDSLLNRLRRFRETYP 119

Query: 121 DLQLIAVEHPMPELARMIQEKQLDIAFMRLPCYASEALRRKILFDDPFVAVIPAVHTLAE 180
           ++QL   E P    A+ +   + DI FMR        L  ++L D+  V  +PA H +A 
Sbjct: 120 NVQLTIREMPSASQAKALLAGEADIGFMRRLPLPVGTLEARLLLDEQIVMALPASHPMAR 179

Query: 181 VEKIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMAQAGF 240
            E + L +   E+ +  P+ +G   +  + A   +AG        A Q+ T + +   GF
Sbjct: 180 FEAVDLREFADEDFVFTPQALGGGYHAQLVALCESAGFYPKVVQEAAQIHTLLGLVACGF 239

Query: 241 GIAIVPLSLTDHLDHSVV----VKTIQDMP 266
           G+A+VP S         V    ++ I D P
Sbjct: 240 GVALVPASFVRSTPRERVQFCPIRPIDDQP 269