Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., LysR family transcriptional regulator from Pseudomonas fluorescens SBW25

 Score =  135 bits (341), Expect = 9e-37
 Identities = 86/290 (29%), Positives = 151/290 (52%), Gaps = 8/290 (2%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           M+ R+++ F  VAE  HF+R+AEQLG++ P L+ QI+++E  L   LF R  R V LTPA
Sbjct: 1   MDIRHLRSFVTVAENLHFSRSAEQLGVSAPTLTAQIQEVESLLEARLFNRTKRSVALTPA 60

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           GE F  +A + L+Q ERA +  ++  RG+   + +G+  S A   V+ +++++     PD
Sbjct: 61  GEAFLTEARATLEQFERAVNVGQRAGRGQVGRVEIGYVGSAAFFGVLQDQIKRFRNQWPD 120

Query: 122 LQLIAVEHPMPELARMIQEKQLDIAFMRLPCYASEALRRKILFDDPFVAVIPAVHTLAE- 180
           + +   E P  +L  ++++ ++D+AF+R+P +  +A+  +IL  D F   +PA H LA+ 
Sbjct: 121 VMVNTKELPTEQLTALLEDGRIDVAFVRMPVHLPDAISSRILARDRFCVALPADHILAKT 180

Query: 181 VEKIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMAQAGF 240
           V+ I+   L  E  ++  + +G      +         +     A   L   +T    G 
Sbjct: 181 VDDIRPSALADELFVLPEQGLG------LREVAKRGRFDPHIGSAPGSLVAVLTQVALGV 234

Query: 241 GIAIVPLSLTDHLD-HSVVVKTIQDMPFVSQVAIVSDAGHHHPLLNRCIA 289
           GIA++P  L   +   +VV + I   P  S+V  +       P++   I+
Sbjct: 235 GIAVIPSVLIQTVQLPNVVFREIAGPPIFSEVGALFRRHERLPIVCNLIS 284