Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., LysR substrate-binding domain-containing protein from Paraburkholderia sabiae LMG 24235

 Score =  167 bits (423), Expect = 3e-46
 Identities = 106/291 (36%), Positives = 159/291 (54%), Gaps = 10/291 (3%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           ME R+++YF AVAE  HF +AAE LGIA P L+ QI+++E  L   LF+R  R V LTPA
Sbjct: 1   MELRHLRYFIAVAERLHFAQAAEALGIAPPTLTVQIQEMERALQAQLFRRTRRSVALTPA 60

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           GE F  +A   + Q ER  +  ++  RGE   + +G+  S A S ++ +++R   ++ P 
Sbjct: 61  GEAFLVEARETIAQFERTLNVGQRAGRGELGRIHIGYVGSAAFSGILQKQLRAFRKSRPH 120

Query: 122 LQLIAVEHPMPELARMIQEKQLDIAFMRLPCYASEALRRKILFDDPFVAVIPAVHTLAEV 181
           + + A EHPM EL  +++E ++D+AF+RLP     +LR  +L  D F   +PA H LA V
Sbjct: 121 VLVQATEHPMGELPALLEEGRVDVAFVRLPVDLPSSLRAHVLVRDAFCVALPAEHPLAAV 180

Query: 182 E-KIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAP-QLRTAITMAQAG 239
              ++   L  EN ++  +++G           +  G    R  +AP  L   +T    G
Sbjct: 181 SGSVKARSLAGENFVVPEQDLG-------TREVARRGRFSPRIVSAPGTLLAVLTQVSVG 233

Query: 240 FGIAIVPLSLTDHLD-HSVVVKTIQDMPFVSQVAIVSDAGHHHPLLNRCIA 289
            G+AIVP  LT  ++  +VV KT+   P VS+VA V     H P   + IA
Sbjct: 234 VGVAIVPNLLTRVVNLPNVVFKTLAGEPIVSEVAAVYRKFEHSPATKKLIA 284