Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., LysR family transcriptional regulator STM3121 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  152 bits (385), Expect = 7e-42
 Identities = 93/276 (33%), Positives = 145/276 (52%), Gaps = 3/276 (1%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           ME R+++YF AVAE  H TRAAE+LGI QPPLS QIK LE ELGV LF R  +GV L+ A
Sbjct: 1   MEIRHLRYFLAVAETGHMTRAAERLGIQQPPLSLQIKALERELGVALFHRHPKGVALSDA 60

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           G LF ++A  ++  +   + R+ + ARGE   L +GF +S A+ +   E +R      P 
Sbjct: 61  GRLFEREARQLVDDMAAMEQRMARVARGELGVLNVGFTSSAAAHAFTPEALRACRRAWPG 120

Query: 122 LQLIAVEHPMPELARMIQEKQLDIAFMRLPCYASEALRRKILFDDPFVAVIPAVHTLAE- 180
           + L   E     +   ++  +L    +R+P    E L  ++L  +P +  +P  H LA+ 
Sbjct: 121 IALSIREDHAAGITEAVEAGRLHCGLIRVPVSQPEGLTFEVLLREPVLVALPGDHALAQR 180

Query: 181 -VEKIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMAQAG 239
               + L  L  E  ++  +   P LY N+     A G     +    ++ T++ +  AG
Sbjct: 181 RSSALTLADLRDEGFILVRQPGAPGLYANLLTLCEAQGFRPRIAAEVERMVTSLNLVAAG 240

Query: 240 FGIAIVPLSLTDHLDHSVVVKTI-QDMPFVSQVAIV 274
            GIA+VP S++    H+VV   + +D P  + + +V
Sbjct: 241 AGIAVVPASMSGLHPHAVVYLPLREDTPLDAPLTLV 276