Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., LysR family transcriptional regulator STM3121 from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  137 bits (345), Expect = 3e-37
 Identities = 95/277 (34%), Positives = 146/277 (52%), Gaps = 8/277 (2%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           ME R+++YF AVA+    +RAA +L +AQPPLS QI++LEEE+G  L  RL RGV LTPA
Sbjct: 1   MELRHLRYFVAVADLGSVSRAASKLFMAQPPLSAQIRQLEEEVGAPLLVRLPRGVRLTPA 60

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           GE F  DA +IL + ++A  R R+R  G+   LR+G   S A+ +V+   +++L      
Sbjct: 61  GESFLVDARAILARAQQATTRARERQAGQRSVLRVGLMPS-ATQTVLPGLLKRLARA--G 117

Query: 122 LQLIAVEHPMPELARMIQ---EKQLDIAFMRLPCYASEALRRKILFDDPFVAVIPAVHTL 178
           LQ+    H +   AR +Q     ++D+ F+R P  +S         DDP+   + A H L
Sbjct: 118 LQVSVEAHELIPSARQLQALRNAEIDLGFIR-PGTSSAPPEAVASIDDPYCLALAANHPL 176

Query: 179 AEVE-KIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMAQ 237
           A     + L  +  E  + F R      +D   A    AG +    + A Q  + ++M  
Sbjct: 177 AGARGPLSLNSVAQEPFVSFSRHAESDYFDQTAALCEEAGFSPDLRHTAGQFVSVLSMVA 236

Query: 238 AGFGIAIVPLSLTDHLDHSVVVKTIQDMPFVSQVAIV 274
           +G G+AIVP S T      VV++ ++     S++ +V
Sbjct: 237 SGLGVAIVPASCTLMAPRQVVLRRLKGPRRPSRLVMV 273