Pairwise Alignments

Query, 293 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism (NCBI) from Escherichia coli BW25113

 Score =  126 bits (316), Expect = 7e-34
 Identities = 95/293 (32%), Positives = 148/293 (50%), Gaps = 5/293 (1%)

Query: 2   MEFRYMKYFAAVAEAKHFTRAAEQLGIAQPPLSQQIKKLEEELGVNLFKRLSRGVELTPA 61
           ME R+++YF AVA+A +FTRAAE+L  +QP LS QI+ LE  +GV L  R  R V LT A
Sbjct: 1   MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAA 60

Query: 62  GELFYQDATSILQQVERAKDRVRQRARGEHLELRLGFAASTASSSVVLEKVRQLHETIPD 121
           GE F QDA +IL+Q E AK R R+  + E  +L +GF  S A  +++ + +       PD
Sbjct: 61  GECFLQDALAILEQAENAKLRARKIVQ-EDRQLTIGFVPS-AEVNLLPKVLPMFRLRQPD 118

Query: 122 LQLIAVEHPMPELARMIQEKQLDIAFMRLPCYASEALRRKILFDDPFVAVIPAVHTLAEV 181
             +  V     +    I+  +LD+  MR P Y+ E +    LFD+P V V+P  H LA  
Sbjct: 119 TLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPE-IDYLELFDEPLVVVLPVDHPLAHE 177

Query: 182 EKIQLIQLNHENVLMFPREVGPALYDNIEAAFSAAGVNIARSYAAPQLRTAITMAQAGFG 241
           ++I   QL+  N +        +L   ++A F+           A  +   + +   G G
Sbjct: 178 KEITAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLG 237

Query: 242 IAIVPLSLTDHLDHSVVVKTIQ-DMPFVSQVAIVSDAGHHHPLLNRCIACMGE 293
           + ++P  + +     VV + I  ++P ++ + +    G   P L   IA + E
Sbjct: 238 VTLIPGYMNNFNTGQVVFRPIAGNVPSIA-LLMAWKKGEMKPALRDFIAIVQE 289