Pairwise Alignments

Query, 188 a.a., ankyrin repeat domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1044 a.a., ankyrin repeat-containing protein from Magnetospirillum magneticum AMB-1

 Score = 50.4 bits (119), Expect = 1e-10
 Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 42  ARSDTSQEYQSLISLFFAAARTGNDEVVNEFLSAGFPINQRNAE--SYTALMVAAYQGNA 99
           A S    ++  + S    A   G+ E V   L  G  ++ R+ +  S T LMVAA +G  
Sbjct: 589 AASGAPLDHPKIRSPLGTAVYGGHVETVRTLLELGAKVDFRSTDDGSRTPLMVAADKGRR 648

Query: 100 QTVELLLRFGANACLQDKRGNTALMGALLKREIQIARALYQA 141
           + +++LL+ GA   L+D  G+TAL  A+ + E+++A AL  A
Sbjct: 649 ELIDILLKAGAARGLKDSEGHTALDIAVTRGEVKVADALRHA 690



 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 27/88 (30%), Positives = 42/88 (47%)

Query: 54  ISLFFAAARTGNDEVVNEFLSAGFPINQRNAESYTALMVAAYQGNAQTVELLLRFGANAC 113
           IS    AA+TG ++++  FL+AG  +N    +  T L  A+ +G+ ++V LLL  GA   
Sbjct: 160 ISFLHLAAKTGRNDLIRRFLAAGLDVNYSTFKRVTPLHFASGEGHLESVRLLLEAGAKPG 219

Query: 114 LQDKRGNTALMGALLKREIQIARALYQA 141
             D  G   +  A       I + L  A
Sbjct: 220 PTDANGEDPIAWAAENGHTAIVQTLLNA 247



 Score = 44.7 bits (104), Expect = 6e-09
 Identities = 27/67 (40%), Positives = 37/67 (55%)

Query: 60  AARTGNDEVVNEFLSAGFPINQRNAESYTALMVAAYQGNAQTVELLLRFGANACLQDKRG 119
           AA  G+   V   L+AG  ++ RN +  TALM AA  G   T+  LL  GA+   ++ RG
Sbjct: 35  AAYDGDVVAVRRMLAAGTAVDARNDQGVTALMAAAGAGQLATISALLDAGADPNSRNIRG 94

Query: 120 NTALMGA 126
           NT L+ A
Sbjct: 95  NTPLIFA 101



 Score = 39.3 bits (90), Expect = 2e-07
 Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 5/134 (3%)

Query: 54  ISLFFAAARTGNDEVVNEFLSAGFPINQRNAESYTALMVAAYQGNAQTVELLLRFGANAC 113
           ++   AAA  G    ++  L AG   N RN    T L+ A    + +TV LLL  G  A 
Sbjct: 62  VTALMAAAGAGQLATISALLDAGADPNSRNIRGNTPLIFATVS-SGETVNLLL--GRGAA 118

Query: 114 LQDK--RGNTALMGALLKREIQIARALYQAECADNLRNKAGLSVQEFAELYGQSETLKAL 171
           + DK     T L  AL    +  A +L           + G+S    A   G+++ ++  
Sbjct: 119 INDKGSEDRTPLDWALADENLATALSLLDHGADIKTIGRGGISFLHLAAKTGRNDLIRRF 178

Query: 172 HQEKLAVSSSTQSR 185
               L V+ ST  R
Sbjct: 179 LAAGLDVNYSTFKR 192



 Score = 35.0 bits (79), Expect = 4e-06
 Identities = 20/53 (37%), Positives = 27/53 (50%)

Query: 59  AAARTGNDEVVNEFLSAGFPINQRNAESYTALMVAAYQGNAQTVELLLRFGAN 111
           AA   G++++V   L  G PI  R       LM+AA+     TV LL+  GAN
Sbjct: 260 AAVTKGHNDIVTLLLDRGAPIETRGFAHRPLLMLAAWSDMPDTVTLLIDRGAN 312



 Score = 34.7 bits (78), Expect = 6e-06
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 1/83 (1%)

Query: 60  AARTGNDEVVNEFLSAGFPINQRNAESYTALMVAAYQGNAQTVELLLRFGANACLQDKRG 119
           AAR G   +   FL+ G  I  RN    T + +AA  G+  TV+ LL   A+   ++K  
Sbjct: 437 AARYGKAAMAIRFLALGADIYARNRAGETPIYLAAENGDLATVQALLDRHADPTQENKLF 496

Query: 120 N-TALMGALLKREIQIARALYQA 141
             T LM A  + + +   AL+Q+
Sbjct: 497 KYTPLMAAADRGKAKAFAALWQS 519



 Score = 31.6 bits (70), Expect = 5e-05
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)

Query: 93  AAYQGNAQTVELLLRFGANACLQDKRGNTALMGALLKREIQIARALYQAECADNLRNKAG 152
           AAY G+   V  +L  G     ++ +G TALM A    ++    AL  A    N RN  G
Sbjct: 35  AAYDGDVVAVRRMLAAGTAVDARNDQGVTALMAAAGAGQLATISALLDAGADPNSRNIRG 94

Query: 153 LSVQEFAELYGQSETLKAL 171
            +   FA +    ET+  L
Sbjct: 95  NTPLIFATV-SSGETVNLL 112



 Score = 26.2 bits (56), Expect = 0.002
 Identities = 17/68 (25%), Positives = 27/68 (39%)

Query: 83  NAESYTALMVAAYQGNAQTVELLLRFGANACLQDKRGNTALMGALLKREIQIARALYQAE 142
           +   YT L +AA  G A      L  GA+   +++ G T +  A    ++   +AL    
Sbjct: 427 DTRGYTPLHLAARYGKAAMAIRFLALGADIYARNRAGETPIYLAAENGDLATVQALLDRH 486

Query: 143 CADNLRNK 150
                 NK
Sbjct: 487 ADPTQENK 494