Pairwise Alignments

Query, 516 a.a., NADH-quinone oxidoreductase subunit L from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., NADH dehydrogenase subunit L from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  169 bits (428), Expect = 3e-46
 Identities = 128/430 (29%), Positives = 208/430 (48%), Gaps = 53/430 (12%)

Query: 61  VDGLGIVMAILVSLLGWVITRFAHRYLQGEAQQARFVTATLFTLSCVALLVTSQHLLVIV 120
           +DGL + M  +V  +G++I  FA  Y++GEA  +RF + T   ++ +  L+   +LL I 
Sbjct: 83  LDGLSVTMLGVVVGVGFLIHLFASWYMRGEAGYSRFFSYTNLFIASMLFLILGDNLLFIY 142

Query: 121 LAWSGTSVGLHRLLTFYPERKAARVVAHKKFLVSRFAEICLLLALGLIYLDVGSLSLQEI 180
             W G  +  + L+ FY   +     A K F+V+R  ++ + + L +++  +G+L++QE+
Sbjct: 143 FGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRIGDVFMAIGLFILFQQLGTLNVQEL 202

Query: 181 HFALNAQDSLPLS---LTGAALLLAFAAILKTAQLPLHGWLIQVMEAPTPVSALLHAG-V 236
              + A +   +    +  A L+L   A+ K+AQLPL  WL   M  PTPVSAL+HA  +
Sbjct: 203 --LVRAPEHFKVGDFWIVLATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATM 260

Query: 237 VNMGGFVLLRVAELIGLVPSAQWLLVIVGSLTAVLAGMVMLTRISIKVRLAWSTCAQMGF 296
           V  G +++ R   L  L P    L+ IVG +T VLAG   L +  IK  LA+ST +Q+G+
Sbjct: 261 VTAGVYLIARTHGLFALAPDILHLVGIVGGVTLVLAGFAALVQTDIKRILAYSTMSQIGY 320

Query: 297 MLMEIGLGLYELALLHLVAHSLYKAYAFLSSGEAVERARLHDFQAPQSVNGKAVGALLAV 356
           M + +G+G +E A+ HL+ H+ +KA  FL+SG  +     H  Q    + G         
Sbjct: 321 MFLALGVGAWEGAIFHLMTHAFFKALLFLASGAVI--VACHHEQNIFKMGG--------- 369

Query: 357 GLSAALILILHHLWQSLTSNLHLPNAVVAILALGFAPL-----------LWQSGRFTPSG 405
                       LW+ L   L   + +V   AL   PL           LW++     +G
Sbjct: 370 ------------LWKKLP--LAYASFIVGGAALSALPLLTAGFYSKDEILWEAFASGNNG 415

Query: 406 LSLGVLRVALLTQLYFVWHLLFAGLAPELRPAS----------PLALSFVMFCFITLYLM 455
           L    L  A +T LY  + L+F     E +  +          PL++  V+  FI   + 
Sbjct: 416 LLYAGLVGAFMTSLY-TFRLIFIAFHGEAKTEAHAGHGIAHWLPLSVLIVLSTFIGALIT 474

Query: 456 QVLLCLYPKS 465
             L  + P+S
Sbjct: 475 PPLAGVLPQS 484