Pairwise Alignments

Query, 516 a.a., NADH-quinone oxidoreductase subunit L from Vibrio cholerae E7946 ATCC 55056

Subject, 479 a.a., hydrogenase 4 membrane subunit (NCBI) from Escherichia coli BW25113

 Score =  105 bits (263), Expect = 3e-27
 Identities = 89/301 (29%), Positives = 148/301 (49%), Gaps = 31/301 (10%)

Query: 47  TLFAIGQASINLVPVDGLGIVMAILVSLLGWVITRFAHRYLQGEAQQA------RFVTAT 100
           TL  +G  ++  + +D +  ++  +V  LG ++T ++  YL  + ++       R+    
Sbjct: 60  TLVNVGDVALFGLVIDRVSTLILFVVVFLGLLVTIYSTGYLTDKNREHPHNGTNRYYAFL 119

Query: 101 LFTLSCVALLVTSQHLLVIVLAWSGTSVGLHRLLTFYPERKAARVVAHKKFLVSRFAEIC 160
           L  +  +A LV S  LL  +L +  T      L+++Y   KA R  A K  L++    + 
Sbjct: 120 LVFIGAMAGLVLSSTLLGQLLFFEITGGCSWALISYYQSDKAQRS-ALKALLITHIGSLG 178

Query: 161 LLLALGLIYLDVGSLSLQEIHFALNAQDSLPLSLTGAALLLAFAAIL-----KTAQLPLH 215
           L LA   ++L  G+       FAL+A   L     G A  L +  IL     K+AQLP+ 
Sbjct: 179 LYLAAATLFLQTGT-------FALSAMSELH----GDARYLVYGGILFAAWGKSAQLPMQ 227

Query: 216 GWLIQVMEAPTPVSALLH-AGVVNMGGFVLLRVAELIGLVPSAQWLLVIVGSLTAVLAGM 274
            WL   MEAPTP+SA LH A +V +G ++  R     G +P     + +V +L  +L G 
Sbjct: 228 AWLPDAMEAPTPISAYLHAASMVKVGVYIFARAIIDGGNIPHVIGGVGMVMALVTILYGF 287

Query: 275 VM-LTRISIKVRLAWSTCAQMGFMLMEIGLGLY------ELALLHLVAHSLYKAYAFLSS 327
           +M L +  +K  LAWST  Q+G+M   + L ++      E ++ ++V H+  K+  FL +
Sbjct: 288 LMYLPQQDMKRLLAWSTITQLGWMFFGLSLSIFGSRLALEGSIAYIVNHAFAKSLFFLVA 347

Query: 328 G 328
           G
Sbjct: 348 G 348