Pairwise Alignments

Query, 516 a.a., NADH-quinone oxidoreductase subunit L from Vibrio cholerae E7946 ATCC 55056

Subject, 672 a.a., NADH dehydrogenase subunit N (NCBI) from Escherichia coli BW25113

 Score = 98.2 bits (243), Expect = 8e-25
 Identities = 87/303 (28%), Positives = 140/303 (46%), Gaps = 30/303 (9%)

Query: 61  VDGLGIVMAILVSLLGWVITRFAHRYL---QGEAQQARFVTATLFTLSCVALLVTSQHLL 117
           +D L   M +++SLL  V + ++  Y+   +G+   A      +F  S VALLV      
Sbjct: 77  MDSLSAFMVLVISLLVVVCSLYSLTYMREYEGKGAAAMGFFMNIFIASMVALLVMDNAFW 136

Query: 118 VIVLAWSGTSVGLHRLLTFYPERKAARVVAHKKFLVSRFAEICLLLALGLIYLDVGSLSL 177
            IVL +   S+     L    + K +       F ++    + +++A  L+  + GSL  
Sbjct: 137 FIVL-FEMMSLSSW-FLVIARQDKTSINAGMLYFFIAHAGSVLIMIAFLLMGRESGSLD- 193

Query: 178 QEIHFALNAQDSLPLSLTGAALLLAFAAI-LKTAQLPLHGWLIQVMEA-PTPVSALLHAG 235
               FA     SL   L  A  LLAF     K   +PLH WL +   A P+  SAL+   
Sbjct: 194 ----FASFRTLSLSPGLASAVFLLAFFGFGAKAGMMPLHSWLPRAHPAAPSHASALMSGV 249

Query: 236 VVNMGGFVLLRVA-ELIGLVPSAQW---LLVIVGSLTAVLAGMVMLTRISIKVRLAWSTC 291
           +V +G F +L+VA +L+       W   L++ +G+++A+L  +  L    IK  LAWST 
Sbjct: 250 MVKIGIFGILKVAMDLLAQTGLPLWWGILVMAIGAISALLGVLYALAEQDIKRLLAWSTV 309

Query: 292 AQMGFMLMEIGLGLYEL--------------ALLHLVAHSLYKAYAFLSSGEAVERARLH 337
             +G +L+ +G+ +  L              AL HL+ H+L+K   FL +G  + R   H
Sbjct: 310 ENVGIILLAVGVAMVGLSLHDPLLTVVGLLGALFHLLNHALFKGLLFLGAGAIISRLHTH 369

Query: 338 DFQ 340
           D +
Sbjct: 370 DME 372



 Score = 25.4 bits (54), Expect = 0.007
 Identities = 28/92 (30%), Positives = 38/92 (41%), Gaps = 8/92 (8%)

Query: 337 HDFQAPQSVNGKAVGALLAVGLSAALILILHHLWQSLTSNLH-LPNAVVAILALGFAPLL 395
           H  +A +  N   V  LL   L   + L    L   +    H   N   A +A G A + 
Sbjct: 463 HAEEAQEVPNTMIVAMLLLAALCVLIALSASWLAPKIMHIAHAFTNTPPATVASGIALV- 521

Query: 396 WQSGRF----TPSGLSLGVLRVALLTQLYFVW 423
              G F    TPS L L +L + LL  LY++W
Sbjct: 522 --PGTFHTQVTPSLLLLLLLAMPLLPGLYWLW 551