Pairwise Alignments

Query, 516 a.a., NADH-quinone oxidoreductase subunit L from Vibrio cholerae E7946 ATCC 55056

Subject, 789 a.a., Na+/H+ antiporter from Agrobacterium fabrum C58

 Score =  142 bits (357), Expect = 6e-38
 Identities = 101/309 (32%), Positives = 165/309 (53%), Gaps = 12/309 (3%)

Query: 61  VDGLGIVMAILVSLLGWVITRFAHRYLQGEAQQARFVTATLFTLSCVALLVTSQHLLVIV 120
           +DGL +  A+L++ +G +I  +A  Y++G  QQ RF++  L  +  +  +V S  +L++ 
Sbjct: 80  IDGLSLTFALLITGIGVLIVLYAGGYMKGHPQQGRFLSFLLLFMGAMLGVVVSDSVLMLF 139

Query: 121 LAWSGTSVGLHRLLTFYPERKAARVVAHKKFLVSRFAEICLLLALGLIYL-DVGSLSLQE 179
           + W  TS+    L+ F  ER A+R  A +  +V+      LLL  GLI++ D+  L+  +
Sbjct: 140 VFWELTSITSFLLIGFDHERAASRRAALQALVVTGGGG--LLLLAGLIFIWDISGLT--Q 195

Query: 180 IHFALNAQDSLPLS--LTGAALLLAFAAILKTAQLPLHGWLIQVMEAPTPVSALLH-AGV 236
           +   +   D L  S     A LL+   A  K+AQ P H WL   MEAPTPVSA LH A +
Sbjct: 196 LSMLVRGGDILRDSPFYLAALLLVLGGAFTKSAQFPFHFWLPNAMEAPTPVSAYLHSATM 255

Query: 237 VNMGGFVLLRVAELIGLVPSAQWLLVIVGSLTAVLAGMVMLTRISIKVRLAWSTCAQMGF 296
           V  G ++L+R+  ++G   + Q LL   G LT +   ++ + +  +K+ LA++T + +G 
Sbjct: 256 VKAGVYLLMRLNPVLGDTAAWQILLPFFGGLTMLTGALLAVRQTDLKLMLAYTTVSSLGL 315

Query: 297 MLMEIGLG---LYELALLHLVAHSLYKAYAFLSSGEAVERARLHDFQAPQSVNGKAVGAL 353
           ++M  G G     E A+L+LVAHSL+K   F+ +G         D      +  KA+   
Sbjct: 316 LVMLTGFGSDHAIEAAVLYLVAHSLFKGALFMVAGIIDHETGTRDVTKLAGLR-KAMPIT 374

Query: 354 LAVGLSAAL 362
            A  L+AA+
Sbjct: 375 FAAALAAAI 383



 Score = 26.2 bits (56), Expect = 0.005
 Identities = 73/318 (22%), Positives = 124/318 (38%), Gaps = 53/318 (16%)

Query: 173 GSLSLQEIHFALNAQDSLPLSLTGAALL---LAFAAILKTAQLPLHGWLIQVMEAPTPVS 229
           G L+ +EI++AL   +   +  TG A+L   L FA        P  G  ++  +      
Sbjct: 393 GFLAKEEIYYALAHGNPRAVLFTGIAILGNGLMFAVAFAVGLKPFLGKPVKTPKNAHEGP 452

Query: 230 ALLHAG--VVNMGGFVLLRVAELIGLVPSAQWLLVIVGSLTAVLAGMVMLTRISIKVRLA 287
            LL  G  ++ + GF +   A +     S          + + +AG      IS+   + 
Sbjct: 453 LLLWLGPALLALKGFTIALFAGIAHFYIST--------PMASAIAGEPRPVEISLIPHIG 504

Query: 288 WSTCAQMGFMLMEIGLGLYELALLHLVAHSLYKAYAFLSSG---------EAVERARLHD 338
                 +G  L+ I LG+     L  V   + +++  L +G         E + R   H 
Sbjct: 505 ----VPLGLSLLTIALGITLYTQLSRVRSLMDRSFKALGAGPDRGFDVFIETLVRMSFHV 560

Query: 339 FQAPQSVNGKAVGALLAV-GLSAALILILHHLWQSLTSNLHLPN-------AVVAILALG 390
            +  Q   G+    + A   + AA++L+   L+  L S    P+         + I   G
Sbjct: 561 TRLIQP--GRLEFYVTATFAVIAAVLLVPLFLYDELPSIPAWPHDMPIHELTFIVIAVAG 618

Query: 391 FAPLLWQSGRFTPSGLSLGVLRVALLTQLYFVWHLLFAGLAPELRPASPLALSFVMFCFI 450
              +L  S R T + ++LG+   A+      V  LLF   AP+        LSF  F   
Sbjct: 619 LLAVLTASSRLT-AIIALGIQGFAVA-----VIFLLFG--APD--------LSFTQFMVE 662

Query: 451 TLYLMQVLLCLYPKSRLS 468
           TL ++ +L  +  + RLS
Sbjct: 663 TLSVV-ILTLVMTRLRLS 679