Pairwise Alignments

Query, 303 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., transcriptional activator protein NhaR from Vibrio cholerae E7946 ATCC 55056

 Score =  131 bits (329), Expect = 2e-35
 Identities = 91/291 (31%), Positives = 144/291 (49%), Gaps = 5/291 (1%)

Query: 14  MRHLNFHHLHYFWTVAKEGHLTRAAQQLNVSQSALSSQIRQLEGQLGHDLFVRQGRSLQL 73
           M HLN++HL+YFW V K+G +T+AA  L ++   ++ QI+ LE +L   L  R GRS++ 
Sbjct: 1   MSHLNYNHLYYFWMVCKQGSVTKAADALFLTPQTVTGQIKALEDRLDGKLTKRNGRSIEP 60

Query: 74  TEVGHLVLEYAESIFNLSGELLSIMESGELQRVQQLRIGSVATLSRNF-QENFLRPVLGK 132
           TE+G LV +YA+ +F LS E+L I+   +   +    +G    LS+    +  L  V G 
Sbjct: 61  TELGQLVFKYADRMFGLSYEMLDIVNYSQRSNL-LFDVGVADALSKRLVSKILLTSVPGD 119

Query: 133 SDVRLILSSSTLEDLLGQLQMHKLDLILSNRPVPSDSTQPWRCKRIAQQSVCLVGPPSDT 192
           + + L    ST E LL QL  HKLD+ILS+ PV S  +     K++ +  +         
Sbjct: 120 NRIHLRCFESTHEMLLEQLAQHKLDMILSDCPVDSSQSPGLFSKKLGESRMSFFS--FGD 177

Query: 193 LRRYQFPQDLPKVKTLVPGASSEIRLQFDLYCEQLGLAVTPYAEVDDMAMLRLLA-RDVE 251
           +    FP  L   K LVPG+ + +  +   + ++ GL      E DD A+++  A    +
Sbjct: 178 VDFAPFPAVLQSKKLLVPGSRTAMGRKVRQWFDRQGLQPHILGEFDDSALMKAFAIYHSD 237

Query: 252 GVTVVPEVVVQDEIETGRLCNYGTLDAVTESFYAITTKRHFDMSIVNRLLD 302
            V + P   V +      L   G +D + E +Y I  +R      V  + D
Sbjct: 238 AVFMAPSFYVSEVDAESSLKLIGHVDEIKEEYYVIFAERMIQHPAVKNVCD 288