Pairwise Alignments

Query, 303 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  142 bits (358), Expect = 9e-39
 Identities = 86/276 (31%), Positives = 141/276 (51%), Gaps = 3/276 (1%)

Query: 17  LNFHHLHYFWTVAKEGHLTRAAQQLNVSQSALSSQIRQLEGQLGHDLFVRQGRSLQLTEV 76
           LN+  LHYFW VAK G +TRA+QQLN++   +S QI   E   G +LF R GR L+LTE 
Sbjct: 2   LNYRQLHYFWAVAKTGSITRASQQLNLTPQTISGQITLFEQTYGLELFQRAGRQLELTET 61

Query: 77  GHLVLEYAESIFNLSGELLSIMESGELQRVQQLRIGSVATLSRNFQENFLRPVLGKSDV- 135
           G   L YAE +F +  EL +++ +G  +++   R+G    + ++     L P +   +V 
Sbjct: 62  GRQALVYAEQMFQIGSELEAMLRAGPQEQI-LFRVGVADVVPKSIVYRLLAPTMDLEEVL 120

Query: 136 RLILSSSTLEDLLGQLQMHKLDLILSNRPVPSDSTQPWRCKRIAQQSVCLVGPPSDTLR- 194
           R+      LE LL  L + +LDL++S+ P+P+        +++ +  +     P+   R 
Sbjct: 121 RINCREDKLERLLADLAIQRLDLVISDSPMPNHLDIKCYSQKLGECGLSFFATPALAQRL 180

Query: 195 RYQFPQDLPKVKTLVPGASSEIRLQFDLYCEQLGLAVTPYAEVDDMAMLRLLARDVEGVT 254
              FP  L     LVPG  + +R +   +  +  +      E DD A+++   +   G+ 
Sbjct: 181 EGPFPACLQDAPLLVPGQETVVRSRLLRWLGEQQVQPRIVGEFDDSALMQAFGQSGSGIF 240

Query: 255 VVPEVVVQDEIETGRLCNYGTLDAVTESFYAITTKR 290
           V P V+ ++      +   G  +AV ESFYAI+ +R
Sbjct: 241 VAPSVIAEEVCRQYGVQLIGQTEAVHESFYAISVER 276