Pairwise Alignments

Query, 303 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., Cys regulon transcriptional activator CysB from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  159 bits (401), Expect = 1e-43
 Identities = 101/290 (34%), Positives = 153/290 (52%), Gaps = 5/290 (1%)

Query: 15  RHLNFHHLHYFWTVAKEGHLTRAAQQLNVSQSALSSQIRQLEGQLGHDLFVRQGRSLQLT 74
           + LN+ HL+YFW  AKEG ++ AA +L ++   +S+Q+RQLE  LGH LF   GR L LT
Sbjct: 3   QELNYRHLYYFWVTAKEGGMSHAAARLGMAVQTVSAQVRQLEQALGHALFKPAGRGLALT 62

Query: 75  EVGHLVLEYAESIFNLSGELL-SIMESGELQRVQQLRIGSVATLSRNFQENFLRPVLGKS 133
           E G   L  AE IF+L  +L  ++ ++   QRV +L +G    L +      L PVL ++
Sbjct: 63  EAGQAALALAEQIFSLGEQLRGAVSDAAGGQRV-RLVVGISDGLPKLAVRELLAPVLTEA 121

Query: 134 DVRLILSSSTLEDLLGQLQMHKLDLILSNRPVPSDSTQPWRCKRIAQQSVCLVGPPS--D 191
           ++RL+    + +DLL  L +H+LD++LS+RP P++         +    +    PP+  D
Sbjct: 122 NLRLLCHEDSFDDLLAALALHRLDVVLSDRPAPANPNLKLYSHALGSSPLGWYAPPAWLD 181

Query: 192 TLRRYQFPQDLPKVKTLVPGASSEIRLQFDLYCEQLGLAVTPYAEVDDMAMLRLLARDVE 251
             RR  FP+ L +V  L+P A S +RL+ D + E+  +      E +D A+L        
Sbjct: 182 AARR-DFPRCLSQVPVLLPTAQSSVRLRIDQWFERQRVVPRVVGEFEDSALLATFGASGM 240

Query: 252 GVTVVPEVVVQDEIETGRLCNYGTLDAVTESFYAITTKRHFDMSIVNRLL 301
           GV    E + +   +   L   G  + V E FYAI T R     +V RLL
Sbjct: 241 GVLPAAERMREQLAQAYGLRGVGPCEGVQEHFYAIGTARKVQHPLVQRLL 290