Pairwise Alignments

Query, 303 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., transcriptional activator NhaR from Serratia liquefaciens MT49

 Score =  135 bits (340), Expect = 1e-36
 Identities = 92/290 (31%), Positives = 140/290 (48%), Gaps = 7/290 (2%)

Query: 14  MRHLNFHHLHYFWTVAKEGHLTRAAQQLNVSQSALSSQIRQLEGQLGHDLFVRQGRSLQL 73
           M H+NF+HL+YFW V KEG +  AA+ L ++   ++ QI+ LE +L   LF RQGR L  
Sbjct: 3   MSHINFNHLYYFWQVCKEGSVVGAAEALFLTPQTITGQIKALEERLDGKLFKRQGRGLVP 62

Query: 74  TEVGHLVLEYAESIFNLSGELLSIMESGELQRVQQLRIGSVATLSRNFQENFLRP--VLG 131
           +E+G LV  YA+ +F LS E+L I+   +   +    +G    LS+      L    V+ 
Sbjct: 63  SELGQLVFRYADKMFMLSQEMLDIVNYRKESNL-LFDVGVADALSKRLVSQVLETAVVVD 121

Query: 132 KSDVRLILSSSTLEDLLGQLQMHKLDLILSNRPVPSDSTQPWRCKRIAQQSVC-LVGPPS 190
              + L    ST E LL QL  HKLD+ILS+ PV S   +     ++ +  +      P+
Sbjct: 122 NEQIHLRCFESTHEMLLEQLSQHKLDMILSDCPVDSSQQEGLFSLKLGECGISFFCRQPA 181

Query: 191 DTLRRYQFPQDLPKVKTLVPGASSEIRLQFDLYCEQLGLAVTPYAEVDDMAMLRLLARDV 250
             L    FP  L + K L+PG  S +  +   +    G+ V    E DD A+++      
Sbjct: 182 PDL---PFPACLEQRKLLIPGRRSMLGRKLLNWFNTQGIQVEILGEFDDAALMKTFGMYH 238

Query: 251 EGVTVVPEVVVQDEIETGRLCNYGTLDAVTESFYAITTKRHFDMSIVNRL 300
             + V P +  QD      +   G +D+V E +Y I  +R      V R+
Sbjct: 239 NAIFVAPTLYAQDTYNDDDVVEIGRIDSVQEEYYIIFAERMIQHPAVQRV 288