Pairwise Alignments

Query, 303 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., Transcriptional activator NhaR from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  129 bits (325), Expect = 6e-35
 Identities = 89/289 (30%), Positives = 144/289 (49%), Gaps = 4/289 (1%)

Query: 13  AMRHLNFHHLHYFWTVAKEGHLTRAAQQLNVSQSALSSQIRQLEGQLGHDLFVRQGRSLQ 72
           +M H+N++HL+YFW V KEG +  AA+ L ++   ++ QI+ LE +L   LF R+GR L+
Sbjct: 2   SMSHINYNHLYYFWHVYKEGSVVGAAEALFLTPQTITGQIKALEERLQGKLFKRKGRGLE 61

Query: 73  LTEVGHLVLEYAESIFNLSGELLSIMESGELQRVQQLRIGSVATLSRNFQENFL-RPVLG 131
            +E+G LV  YA+ +F LS E+L I+   +   +    +G    LS+    + L   V+ 
Sbjct: 62  PSELGELVFRYADKMFTLSQEMLDIVNYRKESNL-LFDVGVADALSKRLVSSVLDAAVVV 120

Query: 132 KSDVRLILSSSTLEDLLGQLQMHKLDLILSNRPVPSDSTQPWRCKRIAQQSVCLVGPPSD 191
              + L    ST E LL QL  HKLD+I+S+ P+ S   +     +I + SV      ++
Sbjct: 121 DEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVKIGECSVSFW--CTN 178

Query: 192 TLRRYQFPQDLPKVKTLVPGASSEIRLQFDLYCEQLGLAVTPYAEVDDMAMLRLLARDVE 251
            L    FP  L + + LVPG  S +  +   +    GL V    E DD A+++      +
Sbjct: 179 PLPEKAFPACLEERRLLVPGRRSMLGRKLLNWFNSQGLQVEILGEFDDAALMKAFGATHD 238

Query: 252 GVTVVPEVVVQDEIETGRLCNYGTLDAVTESFYAITTKRHFDMSIVNRL 300
            + V P +   D      +   G ++ V E ++AI  +R      V R+
Sbjct: 239 AIFVAPSLYSLDFYADESVIEIGRVENVMEEYHAIFAERMIQHPAVQRI 287