Pairwise Alignments

Query, 303 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., DNA-binding transcriptional activator (NCBI) from Escherichia coli BW25113

 Score =  131 bits (330), Expect = 2e-35
 Identities = 90/292 (30%), Positives = 143/292 (48%), Gaps = 10/292 (3%)

Query: 13  AMRHLNFHHLHYFWTVAKEGHLTRAAQQLNVSQSALSSQIRQLEGQLGHDLFVRQGRSLQ 72
           +M H+N++HL+YFW V KEG +  AA+ L ++   ++ QIR LE +L   LF R+GR L+
Sbjct: 2   SMSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEERLQGKLFKRKGRGLE 61

Query: 73  LTEVGHLVLEYAESIFNLSGELLSIMESGELQRVQQLRIGSVATLSRNFQENFLRPVLGK 132
            +E+G LV  YA+ +F LS E+L I+   +   +    +G    LS+    + L   + +
Sbjct: 62  PSELGELVYRYADKMFTLSQEMLDIVNYRKESNL-LFDVGVADALSKRLVSSVLNAAVVE 120

Query: 133 SD-VRLILSSSTLEDLLGQLQMHKLDLILSNRPVPSDSTQPWRCKRIAQQSV---CLVGP 188
            + + L    ST E LL QL  HKLD+I+S+ P+ S   +     RI +  V   C   P
Sbjct: 121 GEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVRIGECGVSFWCTNPP 180

Query: 189 PSDTLRRYQFPQDLPKVKTLVPGASSEIRLQFDLYCEQLGLAVTPYAEVDDMAMLRLLAR 248
           P        FP  L + + L+PG  S +  +   +    GL V    E DD A+++    
Sbjct: 181 PEK-----PFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGA 235

Query: 249 DVEGVTVVPEVVVQDEIETGRLCNYGTLDAVTESFYAITTKRHFDMSIVNRL 300
               + V P +   D      +   G ++ V E ++AI  +R      V R+
Sbjct: 236 MHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERMIQHPAVQRI 287