Pairwise Alignments

Query, 303 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., transcriptional activator NhaR from Escherichia coli ECRC62

 Score =  131 bits (329), Expect = 2e-35
 Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 10/291 (3%)

Query: 14  MRHLNFHHLHYFWTVAKEGHLTRAAQQLNVSQSALSSQIRQLEGQLGHDLFVRQGRSLQL 73
           M H+N++HL+YFW V KEG +  AA+ L ++   ++ QIR LE +L   LF R+GR L+ 
Sbjct: 1   MSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEERLQGKLFKRKGRGLEP 60

Query: 74  TEVGHLVLEYAESIFNLSGELLSIMESGELQRVQQLRIGSVATLSRNFQENFLRPVLGKS 133
           +E+G LV  YA+ +F LS E+L I+   +   +    +G    LS+    + L   + + 
Sbjct: 61  SELGELVYRYADKMFTLSQEMLDIVNYRKESNL-LFDVGVADALSKRLVSSVLNAAVVEG 119

Query: 134 D-VRLILSSSTLEDLLGQLQMHKLDLILSNRPVPSDSTQPWRCKRIAQQSV---CLVGPP 189
           + + L    ST E LL QL  HKLD+I+S+ P+ S   +     RI +  V   C   PP
Sbjct: 120 EPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGLFSVRIGECGVSFWCTNPPP 179

Query: 190 SDTLRRYQFPQDLPKVKTLVPGASSEIRLQFDLYCEQLGLAVTPYAEVDDMAMLRLLARD 249
                   FP  L + + L+PG  S +  +   +    GL V    E DD A+++     
Sbjct: 180 EK-----PFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEILGEFDDAALMKAFGAM 234

Query: 250 VEGVTVVPEVVVQDEIETGRLCNYGTLDAVTESFYAITTKRHFDMSIVNRL 300
              + V P +   D      +   G ++ V E ++AI  +R      V R+
Sbjct: 235 HNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERMIQHPAVQRI 285