Pairwise Alignments

Query, 303 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., transcriptional activator NhaR from Dickeya dadantii 3937

 Score =  130 bits (326), Expect = 5e-35
 Identities = 87/292 (29%), Positives = 141/292 (48%), Gaps = 12/292 (4%)

Query: 14  MRHLNFHHLHYFWTVAKEGHLTRAAQQLNVSQSALSSQIRQLEGQLGHDLFVRQGRSLQL 73
           M H+NF+HL+YFW V K G +  AA++L ++   ++ QI+ LE +L   LF R+GR L+ 
Sbjct: 1   MSHINFNHLYYFWQVCKTGSVAGAAERLFLTPQTITGQIKSLEERLQGKLFKRKGRGLEP 60

Query: 74  TEVGHLVLEYAESIFNLSGELLSIMESGELQRVQQLRIGSVATLSRNFQENFLRPVLG-K 132
           TE+G LV  YA+ +F LS E+L I+   + +      +G    LS+      L  V+  +
Sbjct: 61  TELGQLVFRYADKMFALSQEMLDIVNYRK-ESSLLFDVGVADALSKRLVSRVLETVVNEQ 119

Query: 133 SDVRLILSSSTLEDLLGQLQMHKLDLILSNRPVPSDSTQPWRCKRIAQQSVCLV----GP 188
           + + L    ST E L+ QL  HKLD+ILS+ PV S        +++ +  V       GP
Sbjct: 120 TPIHLRCFESTHEMLIEQLSQHKLDMILSDCPVDSGQQAGLFSRKLGECGVSFYCRRPGP 179

Query: 189 PSDTLRRYQFPQDLPKVKTLVPGASSEIRLQFDLYCEQLGLAVTPYAEVDDMAMLRLLAR 248
                    FP  L + K L+P   + +  +   +  +  L V    E DD A++     
Sbjct: 180 ------NLPFPACLSQRKLLIPARRTMLGRKLLNWFNEQSLPVEIMGEFDDAALMTAFGM 233

Query: 249 DVEGVTVVPEVVVQDEIETGRLCNYGTLDAVTESFYAITTKRHFDMSIVNRL 300
             + + V P +  ++    G +   G LD + + +Y I  +R      V R+
Sbjct: 234 GHDAIFVAPSLHAREMAAQGEMMELGRLDNIQDEYYVIFAERMIQHPAVQRV 285