Pairwise Alignments

Query, 303 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., transcriptional activator of cyn operon; autorepressor from Escherichia coli BL21

 Score = 83.2 bits (204), Expect = 7e-21
 Identities = 75/248 (30%), Positives = 116/248 (46%), Gaps = 16/248 (6%)

Query: 21  HLHYFWTVAKEGHLTRAAQQLNVSQSALSSQIRQLEGQLGHDLFVRQGRSLQLTEVGHLV 80
           H++YF  VA+ G  TRAA  L+VSQ ALS QIRQLE  LG  LF R GR+++LT+ G + 
Sbjct: 5   HINYFLAVAEHGSFTRAASALHVSQPALSQQIRQLEESLGVPLFDRSGRTIRLTDAGEVW 64

Query: 81  LEYA-ESIFNLSGELLSIMESGELQRVQQLRIGSVATLSRNFQENFLRPVLGK-----SD 134
            +YA  ++  L     +I +  +L R   LRI    T    F   F+ P++         
Sbjct: 65  RQYASRALQELGAGKRAIHDVADLTR-GSLRIAVTPT----FTSYFIGPLMADFYARYPS 119

Query: 135 VRLILSSSTLEDLLGQLQMHKLDLILSNRPVPSDSTQPWRCKRIAQQSVCLVGPPSDTLR 194
           + L L   + E +   L   +LD+ ++  PV S   +      +  +S+ LV      L 
Sbjct: 120 ITLQLQEMSQEKIEDMLCRDELDVGIAFAPVHSPELE---AIPLLTESLALVVAQHHPLA 176

Query: 195 RYQ--FPQDLPKVKTLVPGASSEIRLQFDLYCEQLGLAVTPYAEVDDMAMLRLLARDVEG 252
            ++      L   K ++  A    R Q D YCE+ GL      E + ++ +  L R    
Sbjct: 177 VHEQVALSRLHDEKLVLLSAEFATREQIDHYCEKAGLHPQVVIEANSISAVLELIRRTSL 236

Query: 253 VTVVPEVV 260
            T++P  +
Sbjct: 237 STLLPAAI 244