Pairwise Alignments
Query, 556 a.a., lipid A modification system glycine--protein ligase AlmE from Vibrio cholerae E7946 ATCC 55056
Subject, 4317 a.a., non-ribosomal peptide synthase (subunit of ferribactin synthase) from Pseudomonas putida KT2440
Score = 167 bits (423), Expect = 8e-45
Identities = 151/487 (31%), Positives = 225/487 (46%), Gaps = 56/487 (11%)
Query: 78 QRVAILSVRDLAAYSAIWASYLGGMTYIPLNARATTEQIQETLIATQCDSIMVDA---QQ 134
Q VA+L+ R L I S+ G Y+PL+ ++Q + ++ ++ A +Q
Sbjct: 3754 QPVALLAERGLPLLGMIVGSFKAGAGYLPLDPGLPAARLQSIIQLSRTPVLVCSAACAEQ 3813
Query: 135 LSRLSSLLETCIDRLHIYALPDVDVEPLRQQYPQHTFHTVQITEQDVELLVVKYHLDNEH 194
+L LE + R + DV P+ P + DN
Sbjct: 3814 GRQLLGELEASL-RPQLLVWEDVQANPIASHNPG-----------------IHSGPDN-- 3853
Query: 195 EYAYIMQTSGSTGKPKRIAVSYSN-LHCYISQIDKLFPLNAQDRVGQYSDLTFDLSVHDI 253
AY++ TSGSTG PK + V L+ +S++ L L+ QD + Q + +FD+SV
Sbjct: 3854 -LAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYL-ALSEQDVIAQTASQSFDISVWQF 3911
Query: 254 FYSLISGACLYVVPELAKLSPAEFIHHHQ---LTVWLSVPTVIE--LALQRQTLTPHSLP 308
+ + GA + +VP + P + H Q +TV SVP++I+ LA Q +L
Sbjct: 3912 LAAPLFGAKVEIVPNVIAHDPQGLLAHVQATGITVLESVPSLIQGMLASDHQ-----ALD 3966
Query: 309 SLRLSFFCGQALLHDLAEQW-QQATQQPVINLYGPTECTIAVTYHRFVAHSGMAS-VPIG 366
LR G+ + +LA QW Q+ Q ++N YGP EC+ V + R A S S +PIG
Sbjct: 3967 GLRWMLPTGEVMPPELAAQWLQRYPQIGLVNAYGPAECSDDVAFFRVDAASTQGSYLPIG 4026
Query: 367 RAFEEECLAIINEQGELMRFESAPEGYRGELLLSGKQLVKGYLNDPLNTQSAFFQHE--- 423
+ L + E L+ P G GEL ++G + +GY+ DP+ T AF H
Sbjct: 4027 TPTDNNRLYLFGEDQALV-----PLGAVGELCVAGAGVGRGYVGDPVRTALAFIPHPYGA 4081
Query: 424 -GRLWYRSGDIVTKS-NGVLIHLGRRDHQVKIAGQRVELEEIETVVRRVTQAHSVAIVPW 481
G YR+GD+ + +GVL ++GR DHQVKI G R+EL EIE + + A+
Sbjct: 4082 PGERLYRTGDLARQRLDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEIRDAAVA-- 4139
Query: 482 PLSESGYASGTVAFVDTHTQWQPD-LWLSQCKQQLNPT----FVPKRWYAIEQLPRNANG 536
+ E V ++ H D L Q KQ+L VP W + LP NANG
Sbjct: 4140 -VQEGVNGKHLVGYLVAHQGVSADAALLEQVKQRLRAELPEYMVPLHWGWFDSLPHNANG 4198
Query: 537 KTDIKAL 543
K D KAL
Sbjct: 4199 KLDRKAL 4205
Score = 127 bits (318), Expect = 1e-32
Identities = 144/510 (28%), Positives = 219/510 (42%), Gaps = 74/510 (14%)
Query: 58 YQEMTDMALSLSDYWHLQGVQR---VAILSVRDLAAYSAIWASYLGGMTYIPLNARATTE 114
Y + A L+ Y +GV VAI R + A G Y+PL+ E
Sbjct: 1153 YAGLHQQANRLAHYLRDKGVGPDTCVAIAIERSPQLLVGLLAILKAGGAYVPLDVDYPAE 1212
Query: 115 QIQETLIATQCDSIMVDAQ-----QLSRLSSLLETCIDRLHIYALPDVDVEPLRQQYPQH 169
++ L CD+ ++ + +L ++ + +D+LH+ +P H
Sbjct: 1213 RLAYML--ADCDARLLLSHSSLLGKLPQVDGVSAIALDQLHL------------DSWPSH 1258
Query: 170 TFHTVQITEQDVELLVVKYHLDNEHEYAYIMQTSGSTGKPKRIAVSYSNLHCYISQIDKL 229
+ H DN AY++ TSGSTG+PK + +++ L + +
Sbjct: 1259 APG-------------LHLHGDN---LAYVIYTSGSTGQPKGVGNTHAALAERLQWMQTT 1302
Query: 230 FPLNAQDRVGQYSDLTFDLSVHDIFYSLISGACLYVVPELAKLSP---AEFIHHHQLTVW 286
+ LN D + Q + ++FD+SV + F+ L++G L + P A + + +T
Sbjct: 1303 YALNDSDVLMQKAPISFDVSVWECFWPLVTGCKLVLAGPGEHRDPQRIAALVQAYGVTTL 1362
Query: 287 LSVPTVIELALQRQTLTPHSLPSLRLSFFCGQALLHDLAEQWQQATQQPVI-NLYGPTEC 345
VP ++++ +Q + S SLR F G+AL L ++ Q Q + N YGPTE
Sbjct: 1363 HFVPPLLQVFVQEPQASACS--SLRWVFSGGEALSATLRDRVLQVLPQVQLHNRYGPTET 1420
Query: 346 TIAVTYHRFVAHSGMASVPIGRAFEEECLAIINEQGELMRFESAPEGYRGELLLSGKQLV 405
I VT+ G S PIGR +++++ EL SAP G GEL L G L
Sbjct: 1421 AINVTHWHCQVVDGERS-PIGRPLGNVLCRVLDDELEL----SAP-GVPGELYLGGAGLA 1474
Query: 406 KGYLNDPLNTQSAFFQH---EGRLWYRSGDIV--TKSNGVLIHLGRRDHQVKIAGQRVEL 460
+GYL P T F G+ YRSGD L +LGR D QVK+ G RVE
Sbjct: 1475 RGYLGRPGLTAERFVPQADGNGQRLYRSGDRARWQVQLEALEYLGRLDQQVKVRGFRVEP 1534
Query: 461 EEIET-------VVRRVTQAHSVAIVPWPLSESGYASGTVAFVDTHTQWQPDLWLSQCKQ 513
EE++ V + + H AI GY SG+ QP L+ +
Sbjct: 1535 EEVQACLLAQAGVEQALVLIHKDAI---GAQLVGYYSGSA---------QPAEVLAVLAE 1582
Query: 514 QLNPTFVPKRWYAIEQLPRNANGKTDIKAL 543
QL VP + + Q+P +GK D KAL
Sbjct: 1583 QLPAYMVPAQLIPLAQMPLGPSGKVDRKAL 1612
Score = 113 bits (282), Expect = 2e-28
Identities = 138/538 (25%), Positives = 217/538 (40%), Gaps = 59/538 (10%)
Query: 31 ETRHSILAAIQANR-HAPALWVKQKTYTYQEMTDMALSLSDYWHLQGVQ---RVAILSVR 86
+T H + AA A A AL + TY E+ A L+ +GV RV + R
Sbjct: 2177 QTLHGLFAAQAARTPQAGALTFAGQHLTYAELDQQANRLARALRERGVGPQVRVGLALER 2236
Query: 87 DLAAYSAIWASYLGGMTYIPLNARATTEQIQETLIATQCDSIMVDAQQLSRLSSLLETCI 146
L + A Y+PL+ ++++ + ++ ++ L L L E
Sbjct: 2237 SLEMVVGLLAILKADGAYVPLDPEYPLDRLRYMIEDSRIGLLLSQRALLHTLGELPEGVA 2296
Query: 147 ------DRLHIYALPDVDVEPLRQQYPQHTFHTVQITEQDVELLVVKYHLDNEHEYAYIM 200
D + A D ++ L PQH AY++
Sbjct: 2297 SWSLEDDAASLAAYSDAPLDNL--SLPQHQ--------------------------AYLI 2328
Query: 201 QTSGSTGKPKRIAVSYSNLHCYISQIDKLFPLNAQDRVGQYSDLTFDLSVHDIFYSLISG 260
TSGSTGKPK + VS+ + + F + + D + + FD + ++ L+ G
Sbjct: 2329 YTSGSTGKPKGVVVSHGEFAMHCQAVIAAFGMRSDDCELHFYSINFDAASERLWVPLLCG 2388
Query: 261 A--CLYVVPELAKLSPAEFIHHHQLTVWLSVPTVIELALQRQTLTPHSLPSLRLSFFCGQ 318
A L + + + Q+++ P+ Q LP +RL G+
Sbjct: 2389 ARVVLRAQGQWGAEDICQLVREQQVSILGFTPSYGSQLAQYLGGRGEQLP-VRLVITGGE 2447
Query: 319 ALLHDLAEQWQQA-TQQPVINLYGPTECTI--AVTYHRFVAHSGMASVPIGRAFEEECLA 375
AL + ++ +QA Q N YGPTE + + + SVPIGR
Sbjct: 2448 ALTGEHLQRIRQAFAPQQCFNAYGPTETVVMPLACLAPEALPADLGSVPIGRVIGSRTAY 2507
Query: 376 IINEQGELMRFESAPEGYRGELLLSGKQLVKGYLNDPLNTQSAF----FQHEGRLWYRSG 431
I++E L+ P+G GEL + G L +GY + P T F F EG YR+G
Sbjct: 2508 ILDEDLALL-----PQGGIGELYVGGAGLAQGYHDRPGLTAERFVADPFSAEGGRLYRTG 2562
Query: 432 DIV-TKSNGVLIHLGRRDHQVKIAGQRVELEEIETVV---RRVTQAHSVAI-VPWPLSES 486
D+V ++G++ ++GR D QVKI G R+EL EIE+ + V +A +A+ +P
Sbjct: 2563 DLVRLGTDGLVEYVGRADQQVKIRGFRIELGEIESRLLAHEDVDEAVVLALDLPGGKQLV 2622
Query: 487 GYASGTVAFVDTHT-QWQPDLWLSQCKQQLNPTFVPKRWYAIEQLPRNANGKTDIKAL 543
GY A Q + + +Q L VP ++ LP NGK D AL
Sbjct: 2623 GYLVCRQATAGNDVQQLLREAVKADARQHLPDYMVPAHLVLLDSLPLMGNGKLDRHAL 2680
Score = 52.8 bits (125), Expect = 3e-10
Identities = 69/311 (22%), Positives = 123/311 (39%), Gaps = 35/311 (11%)
Query: 195 EYAYIMQTSGSTGKPKRIAVSYSNLHCYISQIDKLF--PLNAQDRVGQYSDLTFDLS-VH 251
+ A++ TSGST PK + VS+ NL I + F LN D + + L D+ +
Sbjct: 167 DIAFLQYTSGSTALPKGVQVSHGNLVANEQLIRQGFGIDLNPDDVIVSWLPLYHDMGLIG 226
Query: 252 DIFYSLISGA-CLYVVPELAKLSPAEF---IHHHQLTVWLSVPTVIELALQR---QTLTP 304
+ + SG C+ + P P + I + T+ L +R +L
Sbjct: 227 GLLQPIFSGVPCVLMSPRYFLARPLRWLQAISEYGGTISGGPDFAYRLCSERVSEASLAG 286
Query: 305 HSLPSLRLSFFCGQALLHD----LAEQWQQATQQP--VINLYGPTECTIAVTYHR----- 353
L R+++ + + D A+++Q P YG E T+ V+ R
Sbjct: 287 LDLSRWRVAYSGSEPIRQDSLATFADKFQACGFDPQSFFASYGLAEATLFVSGSRRGQGI 346
Query: 354 ---------FVAHS---GMASVPIGRAFEEECLAIINEQGELMRFESAPEGYRGELLLSG 401
F A+ G SV + F + A+ E + + + GE+ G
Sbjct: 347 AALELDAKAFAANRAEPGTGSVLMSCGFPQPGHAV--RIVEPQQLQVLGDNQVGEIWAGG 404
Query: 402 KQLVKGYLNDPLNTQSAFFQHEGRLWYRSGDIVTKSNGVLIHLGRRDHQVKIAGQRVELE 461
+ +GY +P + F + +G+ W R+GD+ G + GR + + GQ + +
Sbjct: 405 PSIARGYWRNPEASARTFVEMDGQTWLRTGDLGFIREGEVFVTGRLKDMLIVRGQNLYPQ 464
Query: 462 EIETVVRRVTQ 472
++E + R Q
Sbjct: 465 DLEKALEREVQ 475