Pairwise Alignments

Query, 556 a.a., lipid A modification system glycine--protein ligase AlmE from Vibrio cholerae E7946 ATCC 55056

Subject, 2628 a.a., non-ribosomal peptide synthetase (subunit of ferribactin synthase) from Pseudomonas putida KT2440

 Score =  154 bits (388), Expect = 5e-41
 Identities = 141/547 (25%), Positives = 226/547 (41%), Gaps = 70/547 (12%)

Query: 38   AAIQANRHAPALWVKQKTYTYQEMTDMALSLSDYWHLQGVQ---RVAILSVRDLAAYSAI 94
            A +Q     PA   + + ++Y E+   A  L+      GV     VA+L  RDL+    +
Sbjct: 2015 ATVQRAGQLPAAACQGREWSYAELDQRARRLAGVLQGNGVSVDHLVAVLGERDLSLLGMV 2074

Query: 95   WASYLGGMTYIPLNARATTEQIQETLIATQCDSIMVDAQQLSRLSSLLETCIDRLHIYAL 154
               +  G  Y+ L+      ++ + L  +Q   ++ D   L    ++LE           
Sbjct: 2075 VGVFQAGAGYLSLDPSLPVARLADVLRLSQARVLVCDEHCLGLAQAMLEGF--------- 2125

Query: 155  PDVDVEPLRQQYPQHTFHTVQITEQDVELLVVKYHLDNEHEYAYIMQTSGSTGKPKRIAV 214
                      Q P       Q+        ++   ++     AY++ TSGSTG PK + V
Sbjct: 2126 ----------QAPPTLLVWEQVQAHAAPAQMLHLPINAAKLLAYVIFTSGSTGVPKGVMV 2175

Query: 215  SYSNLHCYISQIDKL--FPLNAQDRVGQYSDLTFDLSVHDIFYSLISGACLYVVPELAKL 272
              + +    +Q+ KL    L   D + Q +  +FD+SV  +  + + G  + + P+    
Sbjct: 2176 EQAGM--LNNQLSKLPYLGLRGSDVIAQTASQSFDISVWQLLTAALCGCRVEIFPDAVAQ 2233

Query: 273  SPAEFIHHHQ---LTVWLSVPTVIELALQRQTLTPHSLPSLRLSFFCGQALLHDLAEQWQ 329
             P   +   +   +T+   VP +I+  L+   L    LP LR     G+A+   LA +W+
Sbjct: 2234 DPQALLQQVEATGVTILECVPAMIQAMLE---LPARQLPRLRYLLTTGEAMSPALARRWR 2290

Query: 330  QATQQ-PVINLYGPTECTIAVTYHRFVAHSGMASVPIGRAFEEECLAIINEQGELMRFES 388
            +   Q  ++N YGP EC+  V  +R    +    +PIG A E   L ++N+       E 
Sbjct: 2291 ERYPQVELVNAYGPAECSDDVALYRVRDDASSVHLPIGAATEHNRLHVLND-----LLEP 2345

Query: 389  APEGYRGELLLSGKQLVKGYLNDPLNTQSAFF-----QHEGRLWYRSGDI--VTKSNGVL 441
             P    GEL ++G  + +GYL DP+ T  +F         G   YRSGD+  V      L
Sbjct: 2346 MPARATGELHVAGVGVGRGYLGDPVRTALSFVPDPFASRPGERLYRSGDLAHVCADGQTL 2405

Query: 442  IHLGRRDHQVKIAGQRVELEEIETVVRRVTQAHSVAIVP------------WPLSESGYA 489
             ++GR D QVKI G R+EL EIE+ +      HS  +V             W   ++  A
Sbjct: 2406 EYVGRADFQVKIRGYRIELGEIESRLLAHEGVHSAVVVDAQVAGGKQLVAYWVARDASVA 2465

Query: 490  SGTVAFVDTHTQWQPDLWLSQCKQQLNPTFVPKRWYAIEQLPRNANGKTDIKAL---QQQ 546
            +  +  V               +  L    VP  W  ++ LP  ANGK D KAL      
Sbjct: 2466 AAEMRSV----------LADYLRASLPGYMVPALWVRLDSLPLTANGKLDRKALPAPDPS 2515

Query: 547  LASQTYE 553
             A Q Y+
Sbjct: 2516 TAQQRYQ 2522



 Score =  138 bits (347), Expect = 3e-36
 Identities = 113/367 (30%), Positives = 169/367 (46%), Gaps = 20/367 (5%)

Query: 197 AYIMQTSGSTGKPKRIAVSYSNLHCYISQIDKLFPLNAQDRVGQYSDLTFDLSVHDIFYS 256
           AY++ TSGSTG+PK + V++  L  Y+  I +   L A   +   S +  DL    +F +
Sbjct: 641 AYVIYTSGSTGQPKGVVVAHGMLANYVQGILQRLQLPADASMAMVSTVAADLGHTVLFGA 700

Query: 257 LISGACLYVVPELAKLSP---AEFIHHHQLTVWLSVPTVIELALQRQTLTPHSLPSLRLS 313
           L SG  L+++       P   A ++  HQ+ V   VP+ ++  LQ       S+   +L 
Sbjct: 701 LASGRLLHLMSREHAFDPDVFASYMAEHQVDVLKIVPSHLQALLQASDAA--SVLPRKLL 758

Query: 314 FFCGQALLHDLAEQWQQATQQ-PVINLYGPTECTIAVTYHRFVAHS-GMASVPIGRAFEE 371
              G+A    L E+ +Q      ++N YGPTE T+ +  H   A    +  VP+G+    
Sbjct: 759 IVGGEASPWSLVEKVRQLKPLCRMVNHYGPTETTVGILSHEVGASEPDLRCVPVGQP--- 815

Query: 372 ECLAIINEQGELMRFESAPEGYR--GELLLSGKQLVKGYLNDPLNTQSAFFQH---EGRL 426
               + N    L+     P G R  GEL L G+ + +GYL  P  T   F      +G  
Sbjct: 816 ----LANSHVYLLDSGLNPVGERVAGELYLGGQGVAQGYLGRPAMTAERFVPDPHGDGTR 871

Query: 427 WYRSGDIVTKSNGVLIHLGRRDHQVKIAGQRVELEEIETVVRRVTQAHSVAIVPWPLSES 486
            YR+GD    + G +  LGR D QVKI G RVE  E+  V+R +   H   ++P  L   
Sbjct: 872 VYRTGDRARLAQGQVEFLGRADDQVKIRGYRVEPGEVGEVLRGMEGVHEAVVLPLALESD 931

Query: 487 GYASGTVAFVDTHTQWQPDLWLSQCKQQLNPTFVPKRWYAIEQLPRNANGKTDIKAL-QQ 545
                 V +  T         L+Q + QL    VP     +EQLP  ANGK D +AL + 
Sbjct: 932 PARLQLVGYCVTAPDVAASALLTQLQAQLPDYMVPAHLVLLEQLPLTANGKLDKRALPKP 991

Query: 546 QLASQTY 552
           ++A + Y
Sbjct: 992 EVAGKAY 998