Pairwise Alignments

Query, 461 a.a., class II fumarate hydratase from Vibrio cholerae E7946 ATCC 55056

Subject, 462 a.a., Fumarate hydratase class II from Xanthobacter sp. DMC5

 Score =  365 bits (937), Expect = e-105
 Identities = 196/459 (42%), Positives = 280/459 (61%), Gaps = 6/459 (1%)

Query: 6   RIEKDSMGEVKVPADALYQAQTQRAVDNFTLSRYTMPSAFIAALAYIKQAAAMTNAQLGH 65
           R E D+ G ++V +D  + AQ QR++ NF +     P   + AL  +K+AAA  N  LG 
Sbjct: 4   RTETDTFGPIEVESDRYWGAQAQRSLGNFKIGWEKQPLPVVRALGIVKRAAAEVNRDLGR 63

Query: 66  LEGDIAQAIANASQAVIDGQYAKQFPIDVFQTGSGTSSNMNANEVIATLASRELG----- 120
           L+  +A+ I  A+Q VI+G+    FP+ V+QTGSGT SNMNANEVI+  A   LG     
Sbjct: 64  LDPKLAETIVAAAQEVIEGKLDAHFPLAVWQTGSGTQSNMNANEVISNRAIEMLGGEMGS 123

Query: 121 -YAVSPNDHVNMGQSSNDVIPTAIQVSAAINIEQQLLPALAHLSQTLADKQSELADVVKT 179
              V PNDHVNM QSSND  PTA+ ++ A  I  +LLPAL HL   LA K +E  D++K 
Sbjct: 124 KKPVHPNDHVNMSQSSNDTYPTAMHIACAEEIVHRLLPALKHLHGALAAKSAEWKDIIKI 183

Query: 180 GRTHLMDAMPVTFAQELGGWKSQIDHAAQGISHALSPIKALAQGGTAVGTGINADPRFAR 239
           GRTH  DA P+T  QE  G+  Q+++  + I   L  +  LAQGGTAVGTG+NA   FA 
Sbjct: 184 GRTHTQDATPLTLGQEFSGYTQQVENGIKRIEMTLPALMELAQGGTAVGTGLNAPVGFAE 243

Query: 240 IFADNLSQLSHVAFQPSDNFFYNLSSQDCVVGLSGQLKTAAVALMKIANDLRWMNSGPLA 299
             A+ ++ ++ + F  + N F  L++ D +V     + T A +L KIAND+R + SGP +
Sbjct: 244 KVAEKIAGITGLPFTSAPNKFEALAAHDAMVFSHSAINTVAASLFKIANDIRLLGSGPRS 303

Query: 300 GLGEIELQGLQPGSSIMPGKVNPVIPEAVTMVAAQVIGNDTTITVAGQSGNFQLNVMLPV 359
           GLGE+ L   +PGSSIMPGKVNP   EA+T V  Q+ GN+  +T AG  G+F+LNV  PV
Sbjct: 304 GLGELSLPENEPGSSIMPGKVNPTQCEALTQVCVQIFGNNAALTFAGSQGHFELNVYNPV 363

Query: 360 IAHNLLESIELLTNACHALADKAIATFKVRHDNLEKALAKNPILVTALNPVIGYLKAADI 419
           +A+N L+S+ L+++A  +  D  +   + R DN++ AL ++ +LVTAL P IGY  AA I
Sbjct: 364 MAYNFLQSVRLMSDAAISFTDNCVVGIEAREDNIKAALERSLMLVTALAPKIGYDNAAKI 423

Query: 420 AKKAYQQGRAILDVAAEETDLDRATLEALLDPKKLTQGG 458
           AK A+++G  + + A     +     + ++ P+K+   G
Sbjct: 424 AKTAHKKGTTLREEAVGGGYVTNEEFDEVVRPEKMISPG 462