Pairwise Alignments

Query, 461 a.a., class II fumarate hydratase from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., fumarate hydratase (class 2) from Pseudomonas putida KT2440

 Score =  397 bits (1019), Expect = e-115
 Identities = 222/459 (48%), Positives = 289/459 (62%), Gaps = 6/459 (1%)

Query: 6   RIEKDSMGEVKVPADALYQAQTQRAVDNFTLSRYTMPSAFIAALAYIKQAAAMTNAQLGH 65
           RIE DS+G V+VP DA + AQTQR++ NF + +  MP A + ALA IK+AAA  N + G 
Sbjct: 3   RIETDSLGPVEVPEDAYWGAQTQRSLINFAIGKERMPLAVLHALALIKKAAARVNDRNGD 62

Query: 66  LEGDIAQAIANASQAVIDGQYAKQFPIDVFQTGSGTSSNMNANEVIATLASRELGYA--- 122
           L  DIA+ I  A+  V+DGQ+  QFP+ V+QTGSGT SNMN NEVIA  A+   G     
Sbjct: 63  LPADIARLIEQAADEVLDGQHDDQFPLVVWQTGSGTQSNMNVNEVIAGRANELAGKGRGG 122

Query: 123 ---VSPNDHVNMGQSSNDVIPTAIQVSAAINIEQQLLPALAHLSQTLADKQSELADVVKT 179
              V PNDHVN  QSSND  PTA+ ++AA  + ++LLPA+  LS  LA+       +VKT
Sbjct: 123 KAPVHPNDHVNRSQSSNDCFPTAMHIAAAQAVHEKLLPAVTELSSGLAELSMRHHKLVKT 182

Query: 180 GRTHLMDAMPVTFAQELGGWKSQIDHAAQGISHALSPIKALAQGGTAVGTGINADPRFAR 239
           GRTH+MDA P+TF QE+  + +Q+D+A + I   L  +  LAQGGTAVGTG+NA   FA 
Sbjct: 183 GRTHMMDATPITFGQEVSAFVAQLDYAQRAIRATLPAVCELAQGGTAVGTGLNAPQGFAE 242

Query: 240 IFADNLSQLSHVAFQPSDNFFYNLSSQDCVVGLSGQLKTAAVALMKIANDLRWMNSGPLA 299
             A  L+ LS + F  + N F  L+  + +  L+G LKT AVALMKIANDLR + SGP A
Sbjct: 243 AIAAELAALSGLPFITAPNKFAALAGHEPLTSLAGALKTLAVALMKIANDLRLLGSGPRA 302

Query: 300 GLGEIELQGLQPGSSIMPGKVNPVIPEAVTMVAAQVIGNDTTITVAGQSGNFQLNVMLPV 359
           GL E+ L   +PGSSIMPGKVNP   EA++M+A QV+GND  I  A   G+ QLNV  PV
Sbjct: 303 GLAEVRLPANEPGSSIMPGKVNPTQCEALSMLACQVLGNDAAIGFAASQGHLQLNVFKPV 362

Query: 360 IAHNLLESIELLTNACHALADKAIATFKVRHDNLEKALAKNPILVTALNPVIGYLKAADI 419
           I HNLL+SIELL + C       +A  +   + +   L +  +LVTALNP IGY KAA+I
Sbjct: 363 IIHNLLQSIELLADGCRNFQQHCVAGIEPDAEQMAAHLERGLMLVTALNPHIGYDKAAEI 422

Query: 420 AKKAYQQGRAILDVAAEETDLDRATLEALLDPKKLTQGG 458
           AKKAY +G  + + A     L     +  + P+ +   G
Sbjct: 423 AKKAYSEGTTLREAALALKYLTNEQFDQWVRPENMLAPG 461