Pairwise Alignments

Query, 461 a.a., class II fumarate hydratase from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., Fumarate hydratase class II (EC 4.2.1.2) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  375 bits (962), Expect = e-108
 Identities = 209/460 (45%), Positives = 282/460 (61%), Gaps = 6/460 (1%)

Query: 2   TREYRIEKDSMGEVKVPADALYQAQTQRAVDNFTLSRYTMPSAFIAALAYIKQAAAMTNA 61
           T   R E+D+ G + VPAD L+ AQTQR++ NF +S    P   I ALA +K+A+A+ N 
Sbjct: 14  TMNTRSERDTFGPIDVPADRLWGAQTQRSLQNFDISGERQPREMIRALAQVKRASAVVNH 73

Query: 62  QLGHLEGDIAQAIANASQAVIDGQYAKQFPIDVFQTGSGTSSNMNANEVIATLASRELG- 120
            LG  +    QAIA A+  VI G +  +FP+ V+QTGSGT +NMN NEV+A  AS  LG 
Sbjct: 74  ALGLQDEKKTQAIAKAADEVIAGGHEVEFPLVVWQTGSGTQTNMNVNEVLANRASELLGG 133

Query: 121 -----YAVSPNDHVNMGQSSNDVIPTAIQVSAAINIEQQLLPALAHLSQTLADKQSELAD 175
                  V PND VN  QSSNDV PTA+ V+A   +  +LLPALA L  TL  K  +   
Sbjct: 134 ERGEGRLVHPNDDVNRSQSSNDVFPTAMHVAAVEALTHRLLPALALLRGTLEQKARDFDG 193

Query: 176 VVKTGRTHLMDAMPVTFAQELGGWKSQIDHAAQGISHALSPIKALAQGGTAVGTGINADP 235
           +VK GRTHL DA P+T  QE  GW +Q+ H    +  AL  +  LA GGTAVGTG+NA  
Sbjct: 194 IVKIGRTHLQDATPLTLGQEFSGWVAQLAHGEAHVRAALPHLCELALGGTAVGTGLNAPK 253

Query: 236 RFARIFADNLSQLSHVAFQPSDNFFYNLSSQDCVVGLSGQLKTAAVALMKIANDLRWMNS 295
            +A   A  L++L+ + F  + N F  ++S D +V   G LKT A +LMKIAND+RW+ S
Sbjct: 254 GYAEQVAAELARLTGLPFVTAPNKFEAMASVDALVHAHGALKTLAASLMKIANDVRWLAS 313

Query: 296 GPLAGLGEIELQGLQPGSSIMPGKVNPVIPEAVTMVAAQVIGNDTTITVAGQSGNFQLNV 355
           GP +G+GE+ +   +PGSSIMPGKVNP   EAVTM+AAQV GND  I   G SGNF+LNV
Sbjct: 314 GPRSGIGELSIPENEPGSSIMPGKVNPTQSEAVTMLAAQVFGNDVAINFGGASGNFELNV 373

Query: 356 MLPVIAHNLLESIELLTNACHALADKAIATFKVRHDNLEKALAKNPILVTALNPVIGYLK 415
             P++AHN L+S+ LL +   +  D      +     + + + ++ +LVTALN  IGY K
Sbjct: 374 FRPMVAHNFLQSVRLLADGMKSFNDHCAVGIEPNRARITELVDRSLMLVTALNTHIGYDK 433

Query: 416 AADIAKKAYQQGRAILDVAAEETDLDRATLEALLDPKKLT 455
           AA IAKKA+++G  + + A     +     +  + P+K+T
Sbjct: 434 AAQIAKKAHKEGTTLREAALALGHVTAEQFDQWVVPEKMT 473