Pairwise Alignments

Query, 461 a.a., class II fumarate hydratase from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., Fumarate hydratase class II from Azospirillum sp. SherDot2

 Score =  395 bits (1016), Expect = e-114
 Identities = 213/459 (46%), Positives = 289/459 (62%), Gaps = 6/459 (1%)

Query: 6   RIEKDSMGEVKVPADALYQAQTQRAVDNFTLSRYTMPSAFIAALAYIKQAAAMTNAQLGH 65
           R E DS G + VPAD  + AQTQR++ NF +    MP   + AL   K+AAA  N  LG 
Sbjct: 5   RTETDSFGPIDVPADRYWGAQTQRSLQNFRIGGERMPVPLVRALGIQKRAAAAANMTLGV 64

Query: 66  LEGDIAQAIANASQAVIDGQYAKQFPIDVFQTGSGTSSNMNANEVIATLASRELGYA--- 122
           L+  +  AI  A+  VIDG+ A  FP+ V+QTGSGT +NMNANEVIA  A   LG     
Sbjct: 65  LDPKLGAAIMEAADEVIDGRLADHFPLVVWQTGSGTQTNMNANEVIANRAIERLGGTMGS 124

Query: 123 ---VSPNDHVNMGQSSNDVIPTAIQVSAAINIEQQLLPALAHLSQTLADKQSELADVVKT 179
              + PNDHVNMGQSSND  PTA+ ++AA  I   L+PAL HL   L  K     D+VK 
Sbjct: 125 KTPIHPNDHVNMGQSSNDSFPTAMHIAAADEIMHSLIPALEHLRTALDAKADAFQDIVKI 184

Query: 180 GRTHLMDAMPVTFAQELGGWKSQIDHAAQGISHALSPIKALAQGGTAVGTGINADPRFAR 239
           GRTHL DA P+T  QE  G+ +Q+ +    +  AL  +  LAQGGTAVGTG+NA P FA 
Sbjct: 185 GRTHLQDATPLTLGQEFSGYAAQVSYGIGRVKGALPQLYRLAQGGTAVGTGLNAKPGFAE 244

Query: 240 IFADNLSQLSHVAFQPSDNFFYNLSSQDCVVGLSGQLKTAAVALMKIANDLRWMNSGPLA 299
            FA+ ++  + + F  ++N F  L++ D +V + G L T AV+LMKIAND+R + SGP +
Sbjct: 245 AFAEEVAAFTGLPFVTAENKFEALATHDSLVDVHGHLNTLAVSLMKIANDIRLLGSGPRS 304

Query: 300 GLGEIELQGLQPGSSIMPGKVNPVIPEAVTMVAAQVIGNDTTITVAGQSGNFQLNVMLPV 359
           G+GE+ L   +PGSSIMPGKVNP   EA+TMV AQV+GN TT+TVAG +G+F+LNV  PV
Sbjct: 305 GIGELSLPENEPGSSIMPGKVNPTQSEAMTMVCAQVMGNHTTVTVAGATGHFELNVFKPV 364

Query: 360 IAHNLLESIELLTNACHALADKAIATFKVRHDNLEKALAKNPILVTALNPVIGYLKAADI 419
           I  N+L+SI LL +A ++  D  +   +   + + K ++ + +LVTALNP IGY  AA I
Sbjct: 365 IVFNVLQSIRLLADAANSFTDNCVVGIEANRERIAKLVSDSLMLVTALNPHIGYDNAAKI 424

Query: 420 AKKAYQQGRAILDVAAEETDLDRATLEALLDPKKLTQGG 458
           AKKA+++G ++ +   E   L     +  + P+++   G
Sbjct: 425 AKKAHKEGTSLKEAGRELGLLTDEQFDQWVRPERMVGPG 463