Pairwise Alignments

Query, 461 a.a., class II fumarate hydratase from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., fumarate hydratase from Agrobacterium fabrum C58

 Score =  359 bits (922), Expect = e-104
 Identities = 195/455 (42%), Positives = 272/455 (59%), Gaps = 6/455 (1%)

Query: 6   RIEKDSMGEVKVPADALYQAQTQRAVDNFTLSRYTMPSAFIAALAYIKQAAAMTNAQLGH 65
           R E D+ G ++V AD  + AQ QR++ NF +     P++ + AL  +KQAAA  N  L  
Sbjct: 5   RTETDTFGPIEVQADRYWGAQAQRSLGNFKIGWEKQPASVVRALGIVKQAAARANMALAG 64

Query: 66  LEGDIAQAIANASQAVIDGQYAKQFPIDVFQTGSGTSSNMNANEVIATLASRELG----- 120
           L+  +  AI  A+Q VIDG+  + FP+ V+QTGSGT SNMNANEVI+  A   LG     
Sbjct: 65  LDPKVGDAIIAAAQEVIDGKLTEHFPLVVWQTGSGTQSNMNANEVISNRAIEMLGGEMGT 124

Query: 121 -YAVSPNDHVNMGQSSNDVIPTAIQVSAAINIEQQLLPALAHLSQTLADKQSELADVVKT 179
              V PNDHVNM QSSND  PTA+ ++    I   LLPAL HL   L  K  +   ++K 
Sbjct: 125 KKPVHPNDHVNMSQSSNDTYPTAMHIACVEEIVHHLLPALKHLHTALEAKVKQFEKIIKI 184

Query: 180 GRTHLMDAMPVTFAQELGGWKSQIDHAAQGISHALSPIKALAQGGTAVGTGINADPRFAR 239
           GRTH  DA P+T  QE  G+ +Q+  A   I   L  +  LAQGGTAVGTG+NA   FA 
Sbjct: 185 GRTHTQDATPLTLGQEFSGYAAQVASAIANIELTLPALSKLAQGGTAVGTGLNAPVGFAE 244

Query: 240 IFADNLSQLSHVAFQPSDNFFYNLSSQDCVVGLSGQLKTAAVALMKIANDLRWMNSGPLA 299
             A+ +S+++ ++F  + N F  L+S D +V   G +  AA AL KIAND+R++ SGP A
Sbjct: 245 KVAEEISEITGLSFVTAPNKFEALASHDSMVFSHGAINAAAAALFKIANDIRFLGSGPRA 304

Query: 300 GLGEIELQGLQPGSSIMPGKVNPVIPEAVTMVAAQVIGNDTTITVAGQSGNFQLNVMLPV 359
           GLGE+ L   +PGSSIMPGKVNP   EA+T V A + GN+  ++ AG  G+F+LNV  P+
Sbjct: 305 GLGELSLPENEPGSSIMPGKVNPTQSEALTQVCAHIFGNNAALSFAGSQGHFELNVYNPM 364

Query: 360 IAHNLLESIELLTNACHALADKAIATFKVRHDNLEKALAKNPILVTALNPVIGYLKAADI 419
           +A+N L+S++LL +A  +  D  +   + R DN+ K +  + +LVTALN  +GY   A I
Sbjct: 365 MAYNFLQSVQLLGDAAVSFTDNCVVGIEAREDNIRKGVENSLMLVTALNGKLGYDICAKI 424

Query: 420 AKKAYQQGRAILDVAAEETDLDRATLEALLDPKKL 454
           AK A++ G  + + A     L     +  + P+ +
Sbjct: 425 AKTAHKNGTTLREEAVGGGYLTNEEFDQYVRPENM 459