Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 537 a.a., Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) from Variovorax sp. SCN45

 Score =  201 bits (510), Expect = 6e-56
 Identities = 108/307 (35%), Positives = 169/307 (55%), Gaps = 3/307 (0%)

Query: 2   LDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFAL 61
           LD + LSR+QFA    +H LF  +T+ L  I+   +  Y+ T    W D+  FW  +F +
Sbjct: 3   LDIVALSRLQFAVTALYHFLFVPLTLGLSIIIAIMETVYVMTGRVIWRDMTKFWGVLFGI 62

Query: 62  TFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRV 121
            FA+GV +GI M FQFG NW  +   VG++ G  L  E + AFFMEATF+G+  FG  ++
Sbjct: 63  NFAMGVATGIVMEFQFGMNWSYYSHYVGDIFGAPLAIEGLMAFFMEATFVGLFFFGWDKL 122

Query: 122 PEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAG--YEVIDGVVHVTSWKEVIFNPSMP 179
            +  H ++T  VA+G++ SA WIL+ N WM  P G  +      + VT +  V+ NP   
Sbjct: 123 SKVGHLIATWAVAIGSNFSALWILIANGWMQNPVGAAFNPQTMRMEVTDFAAVLTNPVAQ 182

Query: 180 YRLAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLH 239
            +  HT+ A  + A+  + G+SA+ +L+    + AK  + VA S    A     ++GD  
Sbjct: 183 AKFVHTVSAGYVCAAVFVLGVSAWYLLKGRHLELAKRSMTVAASFGLAAALSVAVLGDES 242

Query: 240 GLNTLEHQPAKIAAMEGVWQTERG-APLLLFALPNEETRSNDFALGIPNLASLILTHDMN 298
           G  + EHQ  K+AA+E +W+T+   A   +   P++E R   +A+ IP +  LI T  ++
Sbjct: 243 GYLSGEHQKMKLAAIEAMWETQPAPAAFTVIGFPDQEARETHYAIHIPGVMGLIGTRSLD 302

Query: 299 GEIVGLD 305
             + G+D
Sbjct: 303 TVMPGID 309



 Score = 75.5 bits (184), Expect = 4e-18
 Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)

Query: 312 PPVAPLFFGFRVMVGVGVLMLLVSWFGAWRVWRNKPLPKPYMYALIGMTFS---GWVATI 368
           P VAPLF+ FRVMVG+GVL+++++    + V   +     Y + L    F+    W+A  
Sbjct: 386 PQVAPLFWLFRVMVGIGVLLIVLT--ATFFVLSARRKLDSYRWLLKVAVFAIPLPWIAIE 443

Query: 369 AGWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITYVVLLVAYVHTLFYLAR 428
           +GW V E GRQPW++ GVL TA AV+ +   ++ +++  ++  Y  LL+  +  +    R
Sbjct: 444 SGWLVAEFGRQPWVIEGVLPTAVAVSNLGVKTLLLTIAGFIAIYTTLLIIEMKLMLKAIR 503

Query: 429 K---TGHAP 434
           K     HAP
Sbjct: 504 KGPEAEHAP 512