Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-) from Sphingobium sp. HT1-2

 Score =  375 bits (964), Expect = e-108
 Identities = 193/437 (44%), Positives = 281/437 (64%), Gaps = 5/437 (1%)

Query: 2   LDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFAL 61
           +D ++L+R QFA  +SFH LFP  +I L   L   +  +L+T    + +L+ +W+K+FA+
Sbjct: 1   MDAIILARAQFAFTVSFHFLFPAFSIGLASYLAVLEALWLKTGKGVYANLFRYWLKIFAV 60

Query: 62  TFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRV 121
            FA+GVVSGI MS+QFGTNW  F ++ G V GPL+ YEV+TAFF+EA FLGVMLFG  +V
Sbjct: 61  VFAMGVVSGIVMSYQFGTNWSVFSDKAGPVIGPLMAYEVLTAFFLEAGFLGVMLFGINKV 120

Query: 122 PEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEV-IDG-VVHVTSWKEVIFNPSMP 179
              LH ++T+ VA+GT +SAFWIL +NSWM TP GYEV  +G  +   SW  +IFNPS P
Sbjct: 121 GRKLHFVATLAVALGTFISAFWILSVNSWMQTPVGYEVGANGQFLPGPSWLTIIFNPSFP 180

Query: 180 YRLAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLH 239
           YRL HT+LA+ LT +F++  +  + +L++  +  A+    +A+ +AAL  P+QI  GD+H
Sbjct: 181 YRLFHTVLAAYLTTAFIVGAVGGWHLLKDRTNPGARKMFSMAMWMAALVAPIQIFAGDMH 240

Query: 240 GLNTLEHQPAKIAAMEGVWQTE-RGAPLLLFALPNEETRSNDFALGIPNLASLILTHDMN 298
           GLNTL+HQP K+ AMEG +Q+   GAPL+LF +PN   +  D+ + IP  +SLIL H ++
Sbjct: 241 GLNTLKHQPVKVMAMEGHFQSHPHGAPLILFGIPNSAEQRVDYVVEIPKASSLILKHQLD 300

Query: 299 GEIVGLDAF-APDHPPVAPLFFGFRVMVGVGVLMLLVSWFGAWRVWRNKPLPKPYMYAL- 356
             + GLD     D PPV  +F+ FRVMVG+G  ML +        WR        ++   
Sbjct: 301 APLKGLDTVPQADRPPVGIVFWAFRVMVGIGFAMLGIGLLSLIARWRKALYDWSLLHRFA 360

Query: 357 IGMTFSGWVATIAGWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITYVVLL 416
           + M  SG +A +AGW VTE+GRQP+ + G+LRT ++ +P+ + +V  SL  ++I Y  + 
Sbjct: 361 VLMGPSGLIAVLAGWIVTEVGRQPFTIYGLLRTTQSASPLDAPAVASSLLAFVIVYFTVF 420

Query: 417 VAYVHTLFYLARKTGHA 433
              +  L +L +K   A
Sbjct: 421 GMGIWYLLHLMKKPPEA 437