Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., Cytochrome bd-I ubiquinol oxidase subunit 1 from Pseudomonas sp. DMC3

 Score =  396 bits (1017), Expect = e-115
 Identities = 202/446 (45%), Positives = 286/446 (64%), Gaps = 13/446 (2%)

Query: 2   LDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFAL 61
           L+ L L+RIQFA  ISFHILFP ITI L   L   +  +L+T+   + DLY+FW K+FA+
Sbjct: 4   LEALDLARIQFAFTISFHILFPAITIGLASYLAVLEGLWLKTRNDTYRDLYHFWSKIFAV 63

Query: 62  TFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRV 121
            F +GVVSG+ M++QFGTNW  F +  G V GPLL YEV+TAFF+EA FLGVMLFG  +V
Sbjct: 64  NFGMGVVSGLVMAYQFGTNWSRFSDFAGAVTGPLLTYEVLTAFFLEAGFLGVMLFGWNKV 123

Query: 122 PEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGVVHVTSWKEVIFNPSMPYR 181
              LH  STV+VA+GT +S FWIL  NSWM TP G+E+++G V  T W  +IFNPS PYR
Sbjct: 124 GRGLHFFSTVMVAIGTLISTFWILASNSWMQTPQGFEIVNGQVIPTDWLAIIFNPSFPYR 183

Query: 182 LAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHGL 241
           L H   A+ +  +F +   +A+ +LR   + A +  L +A+ +A +  P+Q ++GD HGL
Sbjct: 184 LMHMATAAFVATAFFVGSSAAWHLLRGRDNPAIRTMLSMAMWMALIVAPIQAVIGDFHGL 243

Query: 242 NTLEHQPAKIAAMEGVWQT--ERGAPLLLFALPNEETRSNDFALGIPNLASLILTHDMNG 299
           NTL+HQPAKIAA+EG W+   +   PL+LF  P+ +     FA+ IP L SLILTH ++ 
Sbjct: 244 NTLKHQPAKIAAIEGHWENHGDEATPLILFGWPDMKEERTKFAVEIPYLGSLILTHSLDK 303

Query: 300 EIVGLDAFAP-DHPPVAPLFFGFRVMVGVGVLMLLVSWFGAWRVWRNKP----LPKPYMY 354
           ++  L  F P D P    +F+ FR+MVG+G LM+     G W +W  K       +P+++
Sbjct: 304 QVPALKEFPPEDRPNSTIVFWSFRIMVGLGFLMIFT---GLWSLWLRKRDSLYTSRPFLH 360

Query: 355 ALIGMTFSGWVATIAGWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITYVV 414
             + M  SG +A +AGW+ TEIGRQPW+V G++RTA+A +  +   + I+L ++++ Y  
Sbjct: 361 LALWMGPSGLIAILAGWFTTEIGRQPWVVYGLMRTADASSNHSFMQMSITLIMFVVVYFA 420

Query: 415 LLVAYVHTLFYLARKTGHAPQVSPSS 440
           L  A +  +  L RK    P++S  S
Sbjct: 421 LFGAGLGYMMRLVRK---GPKISEGS 443