Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 514 a.a., cytochrome bd-II oxidase, subunit I (NCBI) from Escherichia coli BW25113

 Score =  230 bits (587), Expect = 7e-65
 Identities = 155/499 (31%), Positives = 233/499 (46%), Gaps = 72/499 (14%)

Query: 1   MLDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFA 60
           M D + LSR QFA    +H LF  +T+ L ++L   +  Y+ T  + + D+  FW K+F 
Sbjct: 1   MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTGKTIYRDMTRFWGKLFG 60

Query: 61  LTFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGR 120
           + FALGV +G+TM FQFGTNW  +   VG++ G  L  E + AFF+E+TF+G+  FG  R
Sbjct: 61  INFALGVATGLTMEFQFGTNWSFYSNYVGDIFGAPLAMEALMAFFLESTFVGLFFFGWQR 120

Query: 121 VPEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAG--YEVIDGVVHVTSWKEVIFNPSM 178
           + ++ H L T LVA G++LSA WIL  N WM  P G  +++    + +TS+ E++FNP  
Sbjct: 121 LNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFDIDTLRMEMTSFSELVFNPVS 180

Query: 179 PYRLAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDL 238
             +  HT++A  +T +  I  ISA+ +LR  +   A     +      LAI   + +GD 
Sbjct: 181 QVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERNVALRSFAIGSVFGTLAIIGTLQLGDS 240

Query: 239 HGLNTLEHQPAKIAAMEGVWQTERG-APLLLFALPNEETRSNDFALGIPNLASLILTHDM 297
                 + QP K+AAMEG WQTE   AP  + A P ++   N FAL IP L  ++ TH +
Sbjct: 241 SAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPEQDQERNAFALKIPALLGILATHSL 300

Query: 298 NGEIVGLDAFAPD-----------------------HPPVAPLFFGFRVMVGVGVLM--- 331
           +  + GL     +                        P V   F G    +G G+L+   
Sbjct: 301 DKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQGNREPHVLQAFRGLEGDLGYGMLLSRY 360

Query: 332 -----------------------LLVSWFGAWRVWRNKPLPKPYMYALIGMTFSG----- 363
                                    V W     V     L    + AL+  T  G     
Sbjct: 361 APDMNHVTAAQYQAAMRGAIPQVAPVFWSFRIMVGCGSLLLLVMLIALV-QTLRGKIDQH 419

Query: 364 -WVATIAGW-------------YVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYL 409
            WV  +A W             ++TE GRQPW +  +L T  A + + +  +  SL + +
Sbjct: 420 RWVLKMALWSLPLPWIAIEAGWFMTEFGRQPWAIQDILPTYSAHSALTTGQLAFSLIMIV 479

Query: 410 ITYVVLLVAYVHTLFYLAR 428
             Y + L+A V+ +   AR
Sbjct: 480 GLYTLFLIAEVYLMQKYAR 498