Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 522 a.a., cytochrome d terminal oxidase, polypeptide subunit I (VIMSS) from Escherichia coli BW25113

 Score =  209 bits (532), Expect = 2e-58
 Identities = 111/314 (35%), Positives = 175/314 (55%), Gaps = 3/314 (0%)

Query: 1   MLDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFA 60
           MLD + LSR+QFA    +H LF  +T+ + ++L   +  Y+ +    + D+  FW K+F 
Sbjct: 1   MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFG 60

Query: 61  LTFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGR 120
           + FALGV +G+TM FQFGTNW  +   VG++ G  L  E + AFF+E+TF+G+  FG  R
Sbjct: 61  INFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDR 120

Query: 121 VPEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTP--AGYEVIDGVVHVTSWKEVIFNPSM 178
           + +  H   T LVA+G++LSA WILV N WM  P  + +      + + S+ E++ NP  
Sbjct: 121 LGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFSELVLNPVA 180

Query: 179 PYRLAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDL 238
             +  HT+ +  +T +  I GISA+ +L+      AK    +A S    A+   I++GD 
Sbjct: 181 QVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDE 240

Query: 239 HGLNTLEHQPAKIAAMEGVWQTERG-APLLLFALPNEETRSNDFALGIPNLASLILTHDM 297
            G    + Q  K+AA+E  W+T+   A   LF +P++E  +N FA+ IP    +I T  +
Sbjct: 241 SGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPDQEEETNKFAIQIPYALGIIATRSV 300

Query: 298 NGEIVGLDAFAPDH 311
           +  ++GL      H
Sbjct: 301 DTPVIGLKELMVQH 314



 Score = 84.0 bits (206), Expect = 1e-20
 Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 10/133 (7%)

Query: 312 PPVAPLFFGFRVMVGVGVLMLLVSWFGAWRVWRNKPLPKPYMY--ALIGMTFSGWVATIA 369
           P VAPL+F FR+MV  G L+L +     W V RN+   K ++   AL G+    W+A  A
Sbjct: 381 PRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLP-WIAVEA 439

Query: 370 GWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITYVVLLVAYVHTLFYLARK 429
           GW+V E GRQPW +  VL TA A + + +  +  S+ L    Y + LVA +  +F  AR 
Sbjct: 440 GWFVAEYGRQPWAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFAR- 498

Query: 430 TGHAPQVSPSSTK 442
                 + PSS K
Sbjct: 499 ------LGPSSLK 505