Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., Cytochrome bd-II ubiquinol oxidase subunit 1 from Azospirillum sp. SherDot2

 Score =  421 bits (1083), Expect = e-122
 Identities = 218/428 (50%), Positives = 293/428 (68%), Gaps = 3/428 (0%)

Query: 2   LDTLMLSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVFAL 61
           LD L+LSRIQFA  ISFHILFP+ T+ L   +   +  ++ T    +  L  FW ++FAL
Sbjct: 3   LDPLILSRIQFAFTISFHILFPSFTVGLACWIALLEALWVGTGKGIYRSLSEFWTRIFAL 62

Query: 62  TFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRGRV 121
           +F LGVVSGI MS+QFGTNW  + + VGNV GPL+ YEV+TAFF+EA FLG++LFGR RV
Sbjct: 63  SFGLGVVSGIVMSYQFGTNWSRWSDTVGNVLGPLIQYEVVTAFFLEAAFLGILLFGRDRV 122

Query: 122 PEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGVVHVTSWKEVIFNPSMPYR 181
           P  +H ++  LVA+GT LS+FWIL  NSWMHTPAG+E+ DG   VT W +V+FNPS PYR
Sbjct: 123 PRGIHLMAACLVALGTLLSSFWILSANSWMHTPAGFEIKDGRYFVTDWWQVVFNPSFPYR 182

Query: 182 LAHTLLASALTASFLIAGISAYQVLRNAKHQAAKMGLKVAVSVAALAIPVQILVGDLHGL 241
           LAH + A  LT SF++AGISA+ +L+      A++GL +A+++  +  P+QI +GD HGL
Sbjct: 183 LAHMVTAMFLTTSFVVAGISAFYLLKRRHFDHARLGLGMALALITVLAPLQIFLGDEHGL 242

Query: 242 NTLEHQPAKIAAMEGVWQTERGAPLLLFALPNEETRSNDFALGIPNLASLILTHDMNGEI 301
           NTLEHQPAKIAAMEG W+    APL+LFA+P+ ET +N   +GIP L+SLILTHD NG +
Sbjct: 243 NTLEHQPAKIAAMEGNWEGGPRAPLVLFAIPDVETETNHLEIGIPALSSLILTHDFNGSV 302

Query: 302 VGLDAF-APDHPPVAPLFFGFRVMVGVGVLMLLVSWFGAWRVWRNKPLPKPYM-YALIGM 359
            GL  F A + P    +F+ FR+MVG+G LML V+        R +     +    L+G 
Sbjct: 303 PGLKQFPADERPDPRIVFWTFRLMVGIGFLMLTVAAVHLVLRVRGRLYSSDWFNRILVGC 362

Query: 360 TFSGWVATIAGWYVTEIGRQPWLVSGVLRTAEAVTP-VASSSVGISLTLYLITYVVLLVA 418
              G+VA +AGW+ TEIGRQPW+V G LRTA+AVTP + + +  +SL  +++ Y ++  A
Sbjct: 363 MPIGFVAILAGWFTTEIGRQPWVVYGHLRTADAVTPSLTAEAALVSLVSFVVAYTLIYGA 422

Query: 419 YVHTLFYL 426
             + L  L
Sbjct: 423 GTYYLIRL 430