Pairwise Alignments

Query, 445 a.a., cytochrome ubiquinol oxidase subunit I from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., Cytochrome d ubiquinol oxidase subunit 1 from Alteromonas macleodii MIT1002

 Score =  201 bits (510), Expect = 6e-56
 Identities = 113/309 (36%), Positives = 175/309 (56%), Gaps = 6/309 (1%)

Query: 1   MLDTLM-LSRIQFAANISFHILFPTITIALGWILVFFKWRYLRTQVSEWLDLYYFWVKVF 59
           M DTL+ LSR QFA    FH +F  +T+ L ++L   +  Y+ T    +  +  FW K+F
Sbjct: 1   MSDTLIELSRWQFALTAMFHFIFVPLTLGLSFLLAIMESVYVMTGKEIYKQMTQFWGKLF 60

Query: 60  ALTFALGVVSGITMSFQFGTNWPGFMERVGNVAGPLLGYEVMTAFFMEATFLGVMLFGRG 119
            + FA+GV +G+TM FQFG NW  +   VG++ G  L  E + AFF+E+TF+G+  FG  
Sbjct: 61  GINFAIGVATGLTMEFQFGMNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWD 120

Query: 120 RVPEWLHTLSTVLVAVGTSLSAFWILVLNSWMHTPAGYEVIDGV--VHVTSWKEVIFNPS 177
           ++ +  H ++T LVA+G++ SA WIL+ N WM  P G E       + +TS+ EVIFNP 
Sbjct: 121 KMSKVKHLMATWLVAIGSNFSALWILIANGWMQYPVGAEFNFEAMRMEMTSFAEVIFNPV 180

Query: 178 MPYRLAHTLLASALTASFLIAGISAYQVLRNAKHQA-AKMGLKVAVSVAALAIPVQILVG 236
              +  HT+ A  +T +  +  IS+Y +L N KH A A+    +A S    +    I++G
Sbjct: 181 AQVKFVHTVSAGYVTGAMFVLAISSYYLL-NHKHIAFARRSFAIAASFGLASTLSVIVLG 239

Query: 237 DLHGLNTLEHQPAKIAAMEGVWQTERG-APLLLFALPNEETRSNDFALGIPNLASLILTH 295
           D  G    + Q  K+AA+E  ++T    AP  +F +PN+E +  ++AL IP    +I T 
Sbjct: 240 DESGYELGDVQKVKLAAVEAEYETHPAPAPFTVFGIPNDEKQETEYALQIPWAMGIIATR 299

Query: 296 DMNGEIVGL 304
            +  E+ G+
Sbjct: 300 SLTEEVKGI 308



 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 9/130 (6%)

Query: 312 PPVAPLFFGFRVMVGVGVLMLLVSWFGAWRVWRNKPLPKPYMY---ALIGMTFSGWVATI 368
           PPVAPLF+ FR+MV  G +ML +     +   ++K + KP      AL G+    W+A  
Sbjct: 382 PPVAPLFWSFRLMVVAGFIMLALFVCAFYYSTKHK-ITKPRWLLKSALYGLPLP-WIACE 439

Query: 369 AGWYVTEIGRQPWLVSGVLRTAEAVTPVASSSVGISLTLYLITYVVLLVAYVHTLFYLAR 428
           AGW+V E GRQPW ++ VL    +V+ +A S V  +L  Y   Y  + +      FYL +
Sbjct: 440 AGWFVAEYGRQPWSIAEVLPVHTSVSNLAVSDVVTTLVAYSAFYTGMFIIG----FYLMK 495

Query: 429 KTGHAPQVSP 438
           K      V P
Sbjct: 496 KFAKKGPVPP 505