Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., cytochrome d ubiquinol oxidase subunit II from Rhodanobacter sp000427505 FW510-R12

 Score =  116 bits (291), Expect = 8e-31
 Identities = 100/372 (26%), Positives = 162/372 (43%), Gaps = 54/372 (14%)

Query: 1   MMQY--LPEIYLLLLGFTVFMYAVLDGYDLGVGILLP--RNDVAQRDRMIASIGPFWDAN 56
           M+ Y  L  I+  LLG  +  +A++DG+D GV  LL     D  +R  ++  I P W+ N
Sbjct: 1   MLDYAMLRVIWWALLGTLLIGFAIMDGFDFGVAGLLKVLGRDNEERQVLLEGIEPTWEGN 60

Query: 57  ETWLVLAVGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKA-KADHKDHWD 115
           + W +LA G    A+P  +++ F+ +Y   AL+L+ALI+R V F+FR K   A     WD
Sbjct: 61  QVWFILAGGATFAAWPMLYAVSFSGMYFAIALVLLALILRPVGFNFRGKIHDARWASLWD 120

Query: 116 LCFKIGSLLAALTQGYMIGRYVVGFESAPE--------------AYAFAVLSALCVAAAY 161
                  L   L  G   G   +G     +               + FA+L  L   A  
Sbjct: 121 WVLTGSGLAVMLLAGVAFGNLFLGLPFRLDDDLRMSWHGGFLDLLHPFALLCGLISLAML 180

Query: 162 VYIGGAWLVLKTEGELQVRA---ARWSR--------KAGWLAALGVLSVSLVNPWVNS-- 208
           +  G  +   K +  +  RA   ARW+          AG   A GV   ++V P   +  
Sbjct: 181 LAHGACFAAFKADHAIAARAVAIARWTTLVFAALYVLAGLWLAWGVPGYAIVGPAATAGV 240

Query: 209 --------AVAERWF-SFPEVILLAPVPIIVFATILVVDRYLKRVPTVNDAGVQWPFFGV 259
                   AV   WF S+ +       P++  A  + V   + R    N AG    F   
Sbjct: 241 SNPLFKQVAVGGSWFASYLQFPWFWAAPLLALAAAVGVQALVGR---RNMAG----FLAS 293

Query: 260 VLIFGLSFLGLAYSFFPEIVP------GIMTAQQAASSPETLMVVGIGVVIVMPTILLYT 313
            ++ G +     ++ FP ++P        +T   A+SS  TL ++ +   +++P ++LYT
Sbjct: 294 SVMVGGTIASAGFALFPFLLPSSLDPRSSLTVWDASSSRGTLQLMLVATAVLLPVVILYT 353

Query: 314 FFVYRIFKGKAT 325
            +VYR+ +G+ T
Sbjct: 354 GWVYRVMRGRVT 365