Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., Cytochrome bd-I ubiquinol oxidase subunit 2 from Xanthobacter sp. DMC5

 Score =  199 bits (506), Expect = 8e-56
 Identities = 125/341 (36%), Positives = 176/341 (51%), Gaps = 39/341 (11%)

Query: 4   YLPEIYLLLLGFTVFMYAVLDGYDLGVGILL---PRNDVAQRDRMIASIGPFWDANETWL 60
           ++P ++     F V +Y + DG DLGVGIL    PR+  A RD M+ASI P WD NETWL
Sbjct: 9   HVPLLFAAAALFCVTVYVLADGLDLGVGILFLAAPRD--ADRDVMMASIEPVWDGNETWL 66

Query: 61  VLAVGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADHKDHWDLCFKI 120
           V+   +L  AFP  + ++    YLP   ML ALI RGVAF FR +A    +  WD  F  
Sbjct: 67  VMGGTLLFAAFPAGYYILLPAFYLPIMFMLFALIFRGVAFGFRLQA-TRFRPVWDAAFFA 125

Query: 121 GSLLAALTQGYMIGRYVVGFE-----SAPEAYAF-AVLSALC---VAAAYVYIGGAWLVL 171
           GSLLA   QG ++G  + G        A  A++F +VL  +C   +   Y  IG  WL+ 
Sbjct: 126 GSLLATFCQGLILGGLIDGVPVENGMFAGGAFSFLSVLGIMCGVGLVGGYALIGAGWLIW 185

Query: 172 KTEGELQVRAARWSRKAGWLAALGVLSVSLVNPWVNSAVAERWFSFPEVILLAPVPIIVF 231
           K +G  QV     +R A  L +  +L VSL + W    VA RWF+ P ++ LAPVP++  
Sbjct: 186 KAQGPTQVFGREIARAALILTSAMMLLVSLWSAWSVPEVAARWFALPNLLWLAPVPLLTL 245

Query: 232 ATILVVDRYLKRVPTVNDAGVQW---------PFFGVVLIFGLSFLGLAYSFFPEIVPGI 282
           A I+               G+ W          F   +++F L   GL  S +P +VP  
Sbjct: 246 AVIV---------------GIWWAIWNGREAQTFVLSLVLFALGLFGLVVSMWPYVVPRQ 290

Query: 283 MTAQQAASSPETLMVVGIGVVIVMPTILLYTFFVYRIFKGK 323
           +T     S P +L  +G+GV++++P +L Y    Y IF+GK
Sbjct: 291 VTVWDGLSDPRSLAFLGVGVMVIIPVVLAYQAHAYWIFRGK 331