Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., Cytochrome bd-I ubiquinol oxidase subunit 2 from Xanthobacter sp. DMC5

 Score =  242 bits (617), Expect = 1e-68
 Identities = 142/338 (42%), Positives = 195/338 (57%), Gaps = 21/338 (6%)

Query: 1   MMQYLPEIYLLLLGFTVFMYAVLDGYDLGVGILLP-RNDVAQRDRMIASIGPFWDANETW 59
           M  YLP I+ L++G  V MY VLDG+DLG+GIL P   +  +RD M+ ++ PFWD NETW
Sbjct: 1   MEWYLPVIWGLIIGVAVIMYVVLDGFDLGIGILFPFAKEEKERDVMMNTVAPFWDGNETW 60

Query: 60  LVLAVGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADHKDHWDLCFK 119
           L+L  G L +AFP A++++   LYLP  +ML+AL+ RGVAF+FR  A A  +  W+  F 
Sbjct: 61  LILGGGGLWVAFPKAYAVVMPALYLPVIIMLLALVFRGVAFEFRWVA-ASSRRLWNFAFS 119

Query: 120 IGSLLAALTQGYMIGRYVVGFESAPEAYA---------FAVLSALCVAAAYVYIGGAWLV 170
            GSL+AA  QG ++G  V G      A+A         FA+L  + V   Y  +G  WL+
Sbjct: 120 AGSLVAAFFQGIILGGLVQGITVKDGAFAGGPLDWATPFALLCGVGVVVGYALLGATWLL 179

Query: 171 LKTEGELQVRAARWSRKAGWLAALGVLS--VSLVNPWVNSAVAERWFSFPEVILLAPVPI 228
           +KTEG +  RA   S     L A+ VL   VSL  P     +A RWFS P +  LAPVPI
Sbjct: 180 VKTEGVIADRAR--SHAIPLLLAVVVLMGLVSLWTPLAFDRIATRWFSRPNIFFLAPVPI 237

Query: 229 IVFATILVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLSFLGLAYSFFPEIVPGIMTAQQA 288
           I      +V  +LK            PFFG + +F L FLGLA S FP +VP  +T  Q 
Sbjct: 238 ITAGLTYLVWHWLK------TGREMLPFFGTIGLFVLGFLGLAISTFPYLVPPSLTVWQT 291

Query: 289 ASSPETLMVVGIGVVIVMPTILLYTFFVYRIFKGKATD 326
           A++P + +++  GV+ ++P +L Y  FVY IF+GK  +
Sbjct: 292 AAAPPSQILMLFGVIFLLPVVLGYIVFVYWIFRGKVRE 329