Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., Cytochrome bd-I ubiquinol oxidase subunit 2 from Xanthobacter sp. DMC5

 Score =  130 bits (328), Expect = 4e-35
 Identities = 110/367 (29%), Positives = 166/367 (45%), Gaps = 61/367 (16%)

Query: 8   IYLLLLGFTVFMYAVLDGYDLGVGILLP---RNDVAQRDRMIASIGPFWDANETWLVLAV 64
           I+ LLLG  +  +A++DG+DLG G+LLP   R D+ +R  +I ++GP W+ N+ WL+L  
Sbjct: 15  IWWLLLGVLLIGFAIMDGFDLGTGMLLPFVARTDLERRV-VINTVGPVWEGNQVWLILGG 73

Query: 65  GILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAK-ADHKDHWDLCFKIGSL 123
           G +  A+P  +++ F+  YL    +L ALI+R V F +R+K + A  +  WD    +G L
Sbjct: 74  GAIFAAWPPLYAVSFSGFYLAMFAILFALILRPVGFKYRSKREGAAWRTAWDWALFVGGL 133

Query: 124 LAALTQGYMIGRYVVG--FESAPEAYAF-------------AVLSALCVAAAYVYIGGAW 168
           + AL  G  +G  + G  F    E   F              +L  L   A  V  G  W
Sbjct: 134 VPALVMGVAVGNVLQGVPFHLNDELRIFYDGTTLIELLNPYGLLCGLLSVAMLVMHGANW 193

Query: 169 LVLKTEGELQVRAARWSRKAGWLAAL-----------GVLSVSLV---------NPWVNS 208
           LVLKTEGE++ RA      A  + AL           GV    +V         NP   +
Sbjct: 194 LVLKTEGEVEARARTIGSAAALVTALLFVLGGAWLYFGVSGYRIVGEIAKDGPSNPLAKA 253

Query: 209 A--VAERWFSFPEVILLAPVPIIVFATILVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLS 266
           A      WF+          P I+   +L +   L     +          G +L   L+
Sbjct: 254 AELSPHAWFA-----NYGARPWIIAGPLLGIAGALASFAALRARRE----IGAILASALA 304

Query: 267 FLGL----AYSFFPEIVPGIMTAQ------QAASSPETLMVVGIGVVIVMPTILLYTFFV 316
             G+      S FP I+P  +  +       A+SS  TL ++ +  V+ +P IL YT +V
Sbjct: 305 IFGIISTVGLSMFPFILPSSIDPRSSLIVWDASSSHLTLFIMLVCAVVFVPVILAYTTWV 364

Query: 317 YRIFKGK 323
           YR+  GK
Sbjct: 365 YRVLWGK 371