Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., cytochrome d ubiquinol oxidase subunit II from Paraburkholderia sabiae LMG 24235

 Score =  189 bits (480), Expect = 8e-53
 Identities = 118/329 (35%), Positives = 170/329 (51%), Gaps = 23/329 (6%)

Query: 8   IYLLLLGFTVFMYAVLDGYDLGVGILLPR-NDVAQRDRMIASIGPFWDANETWLVLAVGI 66
           ++  ++   +F+Y VLDG+DLG+GI+ P   D  +RD M+ ++ P WD NETWLVL    
Sbjct: 6   VWAAIIALGLFIYVVLDGFDLGIGIVFPFFPDEKERDLMMNTVAPVWDGNETWLVLGGAG 65

Query: 67  LLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADHKDHWDLCFKIGSLLAA 126
           L  AFP  +S + + LYLP   ML  LI RGV+F+ RAKA    K  WDL F  GS  AA
Sbjct: 66  LFAAFPVVYSTVLSALYLPLVFMLACLIFRGVSFEIRAKANRT-KHLWDLAFIGGSTGAA 124

Query: 127 LTQGYMIGRYVVGFESAPEAYA---------FAVLSALCVAAAYVYIGGAWLVLKTEGEL 177
             QG  +G ++ G      +YA         F++L+ L +   Y  +G  WLV KTEG+L
Sbjct: 125 FFQGIALGAFLQGIPVVDGSYAGGAFDWLTPFSLLTGLGLVVTYALLGCCWLVAKTEGDL 184

Query: 178 QVRAAR--WSRKAGWLAALG-VLSVSLVNPWVNSAVAERWFSFPEVILLAPVPIIVFATI 234
           Q R  R  W      +  LG ++ VSL  P     +A+RWF       L PVP +V    
Sbjct: 185 QRRLHRVVWPLT---IVLLGFIVVVSLWTPLQEPGIAQRWFDAGIFWRLLPVPFLVAICT 241

Query: 235 LVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLSFLGLAYSFFPEIVPGIMTAQQAASSPET 294
             + R       V D     PF   + +  L ++GL  S +P  +P  +T  +AA+   +
Sbjct: 242 FFMRR------AVRDRHHNTPFMMALGLVLLGYVGLLVSLWPYAIPSSLTLWEAAAPRSS 295

Query: 295 LMVVGIGVVIVMPTILLYTFFVYRIFKGK 323
            M   +G  +++P I+ YT   Y +F+GK
Sbjct: 296 QMFTLVGAAVIIPIIIGYTTMGYWVFRGK 324