Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., cytochrome d ubiquinol oxidase subunit II from Serratia liquefaciens MT49

 Score =  223 bits (569), Expect = 4e-63
 Identities = 124/331 (37%), Positives = 184/331 (55%), Gaps = 16/331 (4%)

Query: 5   LPEIYLLLLGFTVFMYAVLDGYDLGVGILLPR-NDVAQRDRMIASIGPFWDANETWLVLA 63
           LP I+ +++ F+  MY V+DG+DLG+GIL P   D   RD M+ ++ P WD NETWLVL 
Sbjct: 5   LPLIWFVIIVFSTMMYVVMDGFDLGIGILFPWVKDSGDRDVMMNTVAPVWDGNETWLVLG 64

Query: 64  VGILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADHKDHWDLCFKIGSL 123
              L  AFP A+++I   L +P  LML  LI RGVAF+FR KAK + +  WD  F  GSL
Sbjct: 65  GAALFGAFPLAYAVILDALAIPLTLMLFGLIFRGVAFEFRFKAKEEKRHIWDKAFIWGSL 124

Query: 124 LAALTQGYMIGRYVVGFESAPEAYA---------FAVLSALCVAAAYVYIGGAWLVLKTE 174
            A  +QG ++G  + GF     +YA         FA+   L +   Y  +G  WLV+KT 
Sbjct: 125 FATFSQGVVVGAIINGFPVNGRSYAGGALDWLTPFALFCGLGLVVTYALLGCTWLVMKTA 184

Query: 175 GELQVRAARWSRKAGWLAALGVLSVSLVNPWVNSAVAERWFSFPEVILLAPVPIIVFATI 234
           G+LQ R  R +        L +  VS+  P  +  +A RWF+ P +  L PVP++V  + 
Sbjct: 185 GDLQARMYRLATPLLITLLLVLAVVSIWTPIAHPEIASRWFTLPNLFWLLPVPVLVLLSA 244

Query: 235 LVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLSFLGLAYSFFPEIVPGIMTAQQAASSPET 294
             + R +K      +A    PF   +L+  L   GL  S +P ++P  +T   AA+ P++
Sbjct: 245 WGIQRGVK------NAAHYSPFLLTLLLVFLGLSGLGISIWPLLIPPSITLWDAAAPPQS 298

Query: 295 LMVVGIGVVIVMPTILLYTFFVYRIFKGKAT 325
           L  + +G + ++P IL+YTF+ Y +F+GK +
Sbjct: 299 LGFMLVGALFIIPIILVYTFWSYYVFRGKVS 329