Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  122 bits (305), Expect = 2e-32
 Identities = 108/359 (30%), Positives = 166/359 (46%), Gaps = 47/359 (13%)

Query: 8   IYLLLLGFTVFMYAVLDGYDLGVGILLP---RNDVAQRDRMIASIGPFWDANETWLVLAV 64
           I+ LL+G  +  + V DG+D+GVG LLP   RND  +R  +I S+G  W+ N+ WL+LA 
Sbjct: 10  IWWLLIGVILVAFMVTDGFDMGVGCLLPLIARND-DERRVLINSVGAHWEGNQVWLILAG 68

Query: 65  GILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAK-AKADHKDHWDLCFKIGSL 123
           G L  A+P  ++  F+  Y+   L+L AL  R +AFD+R K A A  +  WD    IGSL
Sbjct: 69  GALFAAWPRVYAAAFSGFYVAMILVLCALFFRPLAFDYRGKIANARWRALWDTGLVIGSL 128

Query: 124 LAALTQGYMIGRYVVG--FESAPEAYA------------FAVLSALCVAAAYVYIGGAWL 169
           +  +  G   G   +G  F   P+ +             FA+L  L   +  +  GG WL
Sbjct: 129 VPPVVFGIAFGNLFLGVPFAFTPQLHVDYFGTFWQLLSPFALLCGLLSLSLVIMQGGVWL 188

Query: 170 VLKTEGELQVRAARWSRKAGWLAALGVLSVSLVNPWVNSAV-----AERWFSFPEVILLA 224
            LKTEG ++ RA   +R   + A L V+   L   W+ + V       +  + P   LL 
Sbjct: 189 QLKTEGVIRQRALSATR---YSALLIVICFLLAGYWLWAGVDGFVLLTQDANGPSNPLLK 245

Query: 225 PVPIIVFATI--LVVDRYLKRVPTVNDAGVQWPFFGVV---LIFGLSFLGL--------- 270
            V I+  A +   +    L  +P +        F+  +    I G  F  L         
Sbjct: 246 GVAILPGAWMNHFIRSPLLLIIPLLGMILPILAFYACLRGQTIRGFLFASLTQACVIFTA 305

Query: 271 AYSFFPEIVP------GIMTAQQAASSPETLMVVGIGVVIVMPTILLYTFFVYRIFKGK 323
             + FP ++P        +T   + SS  TL ++ + V+I +P +LLYT + Y    G+
Sbjct: 306 GITLFPFVMPSSVSPLSSLTVWDSTSSQMTLEIMLVIVLIFLPIVLLYTLWSYYKMLGR 364