Pairwise Alignments

Query, 330 a.a., cytochrome BD ubiquinol oxidase subunit II from Vibrio cholerae E7946 ATCC 55056

Subject, 379 a.a., cytochrome d ubiquinol oxidase subunit II from Dickeya dianthicola ME23

 Score =  112 bits (280), Expect = 1e-29
 Identities = 101/363 (27%), Positives = 158/363 (43%), Gaps = 50/363 (13%)

Query: 8   IYLLLLGFTVFMYAVLDGYDLGVGIL---LPRNDVAQRDRMIASIGPFWDANETWLVLAV 64
           ++ LL+G  +  +AV DG+D+GVGIL   + RNDV +R  MI SI P WD N+ WL+ A 
Sbjct: 10  VWWLLIGVLLIGFAVTDGFDMGVGILVRLMGRNDVERRV-MINSIAPHWDGNQVWLITAG 68

Query: 65  GILLIAFPTAHSLIFTELYLPTALMLIALIMRGVAFDFRAKAKADH-KDHWDLCFKIGSL 123
           G L  A+P  ++  F+  Y+   L+L +L  R V FD+R+K +    ++ WD    IGS 
Sbjct: 69  GALFAAWPMVYAAAFSGFYIAMILVLASLYFRPVGFDYRSKIEDPRWRNMWDWGIFIGSF 128

Query: 124 LAALTQGYMIGRYVVGFESAPEAY--------------AFAVLSALCVAAAYVYIGGAWL 169
           +  +  G   G  + G     + Y               F +L+ +   +  V  G  +L
Sbjct: 129 VPPVVIGVAFGNLLQGVPFHVDEYLRLYYTGNFFQLLNPFGLLAGVVSLSMIVAQGATYL 188

Query: 170 VLKTEGELQVRAARWSRKAGWLAALGV-LSVSLVNPW---------VNSAVAERWFSFP- 218
           V++T G+L  RA    +K    ++L + ++ +L   W         V S +     S P 
Sbjct: 189 VMRTSGDLHFRA----KKVAQFSSLALTVTFALAGVWVVYGIDGYAVTSVINTAGESNPL 244

Query: 219 --EVILLAPV--------PIIVFATILVVDRYLKRVPTVNDAGVQWPFFGVVLIFGLSFL 268
             EV   A          P++    +L V   L              F    L      L
Sbjct: 245 HKEVARQAGAWLVNFNHHPVLWAVPLLGVVLPLMTAVMARAEKGAMAFLFSSLSIACVIL 304

Query: 269 GLAYSFFPEIVPGI------MTAQQAASSPETLMVVGIGVVIVMPTILLYTFFVYRIFKG 322
               + FP I+P +      +T   A SS  TL V+ +  +I +P +L YT + Y    G
Sbjct: 305 TAGIAMFPFIMPSVTVPNVSLTIWDATSSLLTLRVMTVVAIIFVPIVLSYTIWCYYKMFG 364

Query: 323 KAT 325
           + T
Sbjct: 365 RIT 367